| 1 | from mantid.simpleapi import * |
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| 2 | import numpy as n |
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| 3 | import os.path |
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| 4 | import sys |
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| 5 | |
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| 6 | def PEARL_startup(usern="matt",thiscycle='11_1'): |
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| 7 | global attenfile |
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| 8 | global currentdatadir |
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| 9 | global livedatadir |
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| 10 | global userdataprocessed |
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| 11 | global calfile |
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| 12 | global groupfile |
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| 13 | global vabsorbfile |
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| 14 | global vanfile |
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| 15 | global tofbinning |
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| 16 | global mode |
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| 17 | global tt_mode |
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| 18 | global mtdplt |
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| 19 | global cycle |
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| 20 | global instver |
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| 21 | import sys |
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| 22 | # sys.path.append('/home/'+usern+'/Scripts/') |
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| 23 | # import Mantid_plotting as mtdplt |
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| 24 | # The lines below set the default value for the rest of the focussing routines |
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| 25 | # currentdatadir="C:\PEARL\RAW\\" |
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| 26 | # currentdatadir="X:\data\cycle_11_1\\" |
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| 27 | currentdatadir="X:/data/cycle_13_4/" |
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| 28 | livedatadir="X:/data/cycle_13_4/" |
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| 29 | # calfile="C:\PEARL\\pearl_offset_11_2.cal" |
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| 30 | calfile="pearl_offset_11_2.cal" |
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| 31 | groupfile="pearl_group_11_2_TT88.cal" |
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| 32 | # groupfile="P:\Mantid\\Calibration\\test_cal_group_mods_11_1.cal" |
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| 33 | vabsorbfile="pearl_absorp_sphere_10mm_newinst_long.nxs" |
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| 34 | vanfile="van_spline_all_cycle_11_1.nxs" |
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| 35 | attenfile="P:\Mantid\\Attentuation\\PRL985_WC_HOYBIDE_NK_10MM_FF.OUT" |
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| 36 | mode="all" |
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| 37 | tt_mode="TT88" |
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| 38 | tofbinning="1500,-0.0006,19900" |
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| 39 | PEARL_setdatadir(currentdatadir) |
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| 40 | print "Raw Data in : ", currentdatadir |
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| 41 | cycle=thiscycle |
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| 42 | instver="new2" |
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| 43 | userdataprocessed="P:\users\\"+"Cycle_"+thiscycle+"\\"+usern+"\\" |
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| 44 | # sys.path.append(userdataprocessed) |
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| 45 | # userdataprocessed="C:\PEARL\\" |
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| 46 | # PEARL_setuserdir(directory=userdataprocessed) |
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| 47 | print "Cycle is set to", cycle |
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| 48 | print "Instrument version is set to ",instver |
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| 49 | print "Processed Data in : ",userdataprocessed |
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| 50 | print "Offset file set to :",calfile |
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| 51 | print "Grouping file set to :",groupfile |
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| 52 | print "Vanadium file is :",vanfile |
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| 53 | print "The default focusing mode is :",mode |
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| 54 | print "Time of flight binning set to :",tofbinning |
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| 55 | print |
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| 56 | return |
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| 57 | |
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| 58 | def PEARL_getlambdarange(): |
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| 59 | return 0.03,6.00 |
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| 60 | |
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| 61 | def PEARL_gettofrange(): |
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| 62 | return 150,19900 |
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| 63 | |
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| 64 | |
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| 65 | def PEARL_getmonitorspectrum(runno): |
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| 66 | |
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| 67 | if (runno < 71009): |
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| 68 | if (mode == "trans"): |
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| 69 | mspectra=1081 |
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| 70 | elif (mode == "all"): |
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| 71 | mspectra=2721 |
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| 72 | elif (mode == "novan"): |
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| 73 | mspectra=2721 |
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| 74 | else: |
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| 75 | print "Sorry mode not supported" |
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| 76 | sys.exit(0) |
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| 77 | else: |
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| 78 | mspectra=1 |
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| 79 | |
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| 80 | print "Monitor spectrum is", mspectra |
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| 81 | |
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| 82 | return mspectra |
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| 83 | |
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| 84 | def PEARL_getcycle(number): |
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| 85 | |
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| 86 | global cycle |
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| 87 | global instver |
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| 88 | global datadir |
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| 89 | |
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| 90 | if type(number) is int: |
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| 91 | runno=number |
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| 92 | else: |
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| 93 | num=number.split("_") |
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| 94 | runno=int(num[0]) |
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| 95 | |
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| 96 | print "The run number is get cycle is", runno |
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| 97 | if (runno < 71009): |
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| 98 | cycle="10_2" |
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| 99 | print "cycle is set to", cycle |
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| 100 | instver="old" |
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| 101 | datadir="X:\data\cycle_"+cycle+"\\" |
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| 102 | PEARL_setdatadir(datadir) |
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| 103 | elif (runno < 71084): |
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| 104 | cycle="11_1" |
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| 105 | print "cycle is set to", cycle |
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| 106 | instver="new" |
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| 107 | datadir="X:\data\cycle_"+cycle+"\\" |
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| 108 | PEARL_setdatadir(datadir) |
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| 109 | elif (runno < 71991): |
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| 110 | cycle="11_2" |
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| 111 | print "cycle is set to", cycle |
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| 112 | instver="new" |
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| 113 | datadir="X:\data\cycle_"+cycle+"\\" |
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| 114 | PEARL_setdatadir(datadir) |
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| 115 | elif (runno < 73064): |
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| 116 | cycle="11_3" |
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| 117 | print "cycle is set to", cycle |
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| 118 | instver="new" |
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| 119 | datadir="X:\data\cycle_"+cycle+"\\" |
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| 120 | PEARL_setdatadir(datadir) |
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| 121 | elif (runno < 73984): |
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| 122 | cycle="11_4" |
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| 123 | print "cycle is set to", cycle |
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| 124 | instver="new" |
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| 125 | datadir="X:\data\cycle_"+cycle+"\\" |
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| 126 | PEARL_setdatadir(datadir) |
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| 127 | elif (runno < 74757): |
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| 128 | cycle="11_5" |
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| 129 | print "cycle is set to", cycle |
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| 130 | instver="new" |
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| 131 | datadir="X:\data\cycle_"+cycle+"\\" |
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| 132 | PEARL_setdatadir(datadir) |
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| 133 | elif (runno < 75552): |
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| 134 | cycle="12_1" |
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| 135 | print "cycle is set to", cycle |
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| 136 | instver="new2" |
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| 137 | datadir="X:\data\cycle_"+cycle+"\\" |
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| 138 | PEARL_setdatadir(datadir) |
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| 139 | elif (runno < 76662): |
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| 140 | cycle="12_2" |
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| 141 | print "cycle is set to", cycle |
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| 142 | instver="new2" |
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| 143 | datadir="X:\data\cycle_"+cycle+"\\" |
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| 144 | PEARL_setdatadir(datadir) |
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| 145 | elif (runno < 77677): |
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| 146 | cycle="12_3" |
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| 147 | print "cycle is set to", cycle |
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| 148 | instver="new2" |
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| 149 | datadir="X:\data\cycle_"+cycle+"\\" |
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| 150 | PEARL_setdatadir(datadir) |
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| 151 | elif (runno < 78610): |
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| 152 | cycle="12_4" |
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| 153 | print "cycle is set to", cycle |
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| 154 | instver="new2" |
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| 155 | datadir="X:\data\cycle_"+cycle+"\\" |
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| 156 | PEARL_setdatadir(datadir) |
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| 157 | elif (runno < 80073): |
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| 158 | cycle="12_5" |
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| 159 | print "cycle is set to", cycle |
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| 160 | instver="new2" |
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| 161 | datadir="X:\data\cycle_"+cycle+"\\" |
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| 162 | PEARL_setdatadir(datadir) |
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| 163 | elif (runno < 80812): |
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| 164 | cycle="13_1" |
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| 165 | print "cycle is set to", cycle |
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| 166 | instver="new2" |
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| 167 | datadir="X:\data\cycle_"+cycle+"\\" |
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| 168 | PEARL_setdatadir(datadir) |
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| 169 | elif (runno < 81280): |
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| 170 | cycle="13_2" |
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| 171 | print "cycle is set to", cycle |
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| 172 | instver="new2" |
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| 173 | datadir="X:\data\cycle_"+cycle+"\\" |
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| 174 | PEARL_setdatadir(datadir) |
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| 175 | elif (runno < 82317): |
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| 176 | cycle="13_3" |
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| 177 | print "cycle is set to", cycle |
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| 178 | instver="new2" |
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| 179 | datadir="X:\data\cycle_"+cycle+"\\" |
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| 180 | PEARL_setdatadir(datadir) |
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| 181 | else: |
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| 182 | cycle="13_4" |
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| 183 | print "cycle is set to", cycle |
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| 184 | instver="new2" |
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| 185 | datadir=""#r"\\isis\inst$/NDXPEARL/Instrument/data/cycle_13_4/" |
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| 186 | |
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| 187 | PEARL_setdatadir(currentdatadir) |
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| 188 | |
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| 189 | |
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| 190 | print "ISIS cycle is set to", cycle |
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| 191 | |
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| 192 | return |
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| 193 | |
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| 194 | |
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| 195 | |
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| 196 | def PEARL_getcalibfiles(): |
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| 197 | global calfile |
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| 198 | global groupfile |
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| 199 | global vabsorbfile |
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| 200 | global vanfile |
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| 201 | |
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| 202 | print "Setting calibration for cycle", cycle |
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| 203 | |
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| 204 | if (cycle=="13_4"): |
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| 205 | instver="new2" |
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| 206 | calfile="pearl_offset_13_4.cal" |
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| 207 | vabsorbfile="pearl_absorp_sphere_10mm_newinst2_long.nxs" |
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| 208 | |
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| 209 | if (tt_mode=="TT88"): |
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| 210 | groupfile="pearl_group_12_1_TT88.cal" |
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| 211 | vanfile="van_spline_TT88_cycle_13_3.nxs" |
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| 212 | elif (tt_mode=="TT70"): |
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| 213 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT70.cal" |
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| 214 | vanfile="P:\Mantid\\Calibration\\van_spline_TT70_cycle_13_3.nxs" |
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| 215 | elif (tt_mode=="TT35"): |
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| 216 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT35.cal" |
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| 217 | vanfile="P:\Mantid\\Calibration\\van_spline_TT35_cycle_13_3.nxs" |
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| 218 | else: |
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| 219 | print "Sorry I don't know that Two Theta mode so assuming T88" |
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| 220 | groupfile="pearl_group_12_1_TT88.cal" |
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| 221 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_13_3.nxs" |
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| 222 | elif (cycle=="13_3"): |
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| 223 | instver="new2" |
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| 224 | calfile="P:\Mantid\\Calibration\\pearl_offset_13_3.cal" |
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| 225 | vabsorbfile="P:\Mantid\\Calibration\\pearl_absorp_sphere_10mm_newinst2_long.nxs" |
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| 226 | |
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| 227 | if (tt_mode=="TT88"): |
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| 228 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT88.cal" |
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| 229 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_13_3.nxs" |
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| 230 | elif (tt_mode=="TT70"): |
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| 231 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT70.cal" |
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| 232 | vanfile="P:\Mantid\\Calibration\\van_spline_TT70_cycle_13_3.nxs" |
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| 233 | elif (tt_mode=="TT35"): |
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| 234 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT35.cal" |
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| 235 | vanfile="P:\Mantid\\Calibration\\van_spline_TT35_cycle_13_3.nxs" |
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| 236 | else: |
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| 237 | print "Sorry I don't know that Two Theta mode so assuming T88" |
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| 238 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT88.cal" |
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| 239 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_13_3.nxs" |
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| 240 | elif (cycle=="13_2"): |
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| 241 | instver="new2" |
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| 242 | calfile="P:\Mantid\\Calibration\\pearl_offset_13_2.cal" |
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| 243 | vabsorbfile="P:\Mantid\\Calibration\\pearl_absorp_sphere_10mm_newinst2_long.nxs" |
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| 244 | |
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| 245 | if (tt_mode=="TT88"): |
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| 246 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT88.cal" |
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| 247 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_13_2.nxs" |
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| 248 | elif (tt_mode=="TT70"): |
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| 249 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT70.cal" |
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| 250 | vanfile="P:\Mantid\\Calibration\\van_spline_TT70_cycle_13_2.nxs" |
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| 251 | elif (tt_mode=="TT35"): |
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| 252 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT35.cal" |
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| 253 | vanfile="P:\Mantid\\Calibration\\van_spline_TT35_cycle_13_2.nxs" |
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| 254 | else: |
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| 255 | print "Sorry I don't know that Two Theta mode so assuming T88" |
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| 256 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT88.cal" |
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| 257 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_13_2.nxs" |
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| 258 | elif (cycle=="13_1"): |
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| 259 | instver="new2" |
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| 260 | calfile="P:\Mantid\\Calibration\\pearl_offset_13_1.cal" |
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| 261 | vabsorbfile="P:\Mantid\\Calibration\\pearl_absorp_sphere_10mm_newinst2_long.nxs" |
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| 262 | |
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| 263 | if (tt_mode=="TT88"): |
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| 264 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT88.cal" |
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| 265 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_13_1.nxs" |
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| 266 | elif (tt_mode=="TT70"): |
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| 267 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT70.cal" |
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| 268 | vanfile="P:\Mantid\\Calibration\\van_spline_TT70_cycle_13_1.nxs" |
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| 269 | elif (tt_mode=="TT35"): |
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| 270 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT35.cal" |
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| 271 | vanfile="P:\Mantid\\Calibration\\van_spline_TT35_cycle_13_1.nxs" |
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| 272 | else: |
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| 273 | print "Sorry I don't know that Two Theta mode so assuming T88" |
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| 274 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT88.cal" |
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| 275 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_13_1.nxs" |
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| 276 | elif (cycle=="12_5"): |
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| 277 | instver="new2" |
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| 278 | calfile="P:\Mantid\\Calibration\\pearl_offset_12_5.cal" |
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| 279 | vabsorbfile="P:\Mantid\\Calibration\\pearl_absorp_sphere_10mm_newinst2_long.nxs" |
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| 280 | |
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| 281 | if (tt_mode=="TT88"): |
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| 282 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT88.cal" |
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| 283 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_12_5.nxs" |
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| 284 | elif (tt_mode=="TT70"): |
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| 285 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT70.cal" |
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| 286 | vanfile="P:\Mantid\\Calibration\\van_spline_TT70_cycle_12_5.nxs" |
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| 287 | elif (tt_mode=="TT35"): |
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| 288 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT35.cal" |
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| 289 | vanfile="P:\Mantid\\Calibration\\van_spline_TT35_cycle_12_5.nxs" |
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| 290 | else: |
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| 291 | print "Sorry I don't know that Two Theta mode so assuming T88" |
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| 292 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT88.cal" |
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| 293 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_12_5.nxs" |
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| 294 | elif (cycle=="12_4"): |
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| 295 | instver="new2" |
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| 296 | calfile="P:\Mantid\\Calibration\\pearl_offset_12_4.cal" |
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| 297 | vabsorbfile="P:\Mantid\\Calibration\\pearl_absorp_sphere_10mm_newinst2_long.nxs" |
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| 298 | |
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| 299 | if (tt_mode=="TT88"): |
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| 300 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT88.cal" |
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| 301 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_12_4.nxs" |
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| 302 | elif (tt_mode=="TT70"): |
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| 303 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT70.cal" |
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| 304 | vanfile="P:\Mantid\\Calibration\\van_spline_TT70_cycle_12_4.nxs" |
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| 305 | elif (tt_mode=="TT35"): |
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| 306 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT35.cal" |
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| 307 | vanfile="P:\Mantid\\Calibration\\van_spline_TT35_cycle_12_4.nxs" |
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| 308 | else: |
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| 309 | print "Sorry I don't know that Two Theta mode so assuming T88" |
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| 310 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT88.cal" |
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| 311 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_12_4.nxs" |
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| 312 | elif (cycle=="12_3"): |
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| 313 | instver="new2" |
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| 314 | calfile="P:\Mantid\\Calibration\\pearl_offset_12_3.cal" |
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| 315 | vabsorbfile="P:\Mantid\\Calibration\\pearl_absorp_sphere_10mm_newinst2_long.nxs" |
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| 316 | |
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| 317 | if (tt_mode=="TT88"): |
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| 318 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT88.cal" |
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| 319 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_12_3.nxs" |
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| 320 | elif (tt_mode=="TT70"): |
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| 321 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT70.cal" |
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| 322 | vanfile="P:\Mantid\\Calibration\\van_spline_TT70_cycle_12_3.nxs" |
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| 323 | elif (tt_mode=="TT35"): |
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| 324 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT35.cal" |
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| 325 | vanfile="P:\Mantid\\Calibration\\van_spline_TT35_cycle_12_3.nxs" |
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| 326 | else: |
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| 327 | print "Sorry I don't know that Two Theta mode so assuming T88" |
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| 328 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT88.cal" |
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| 329 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_12_3.nxs" |
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| 330 | elif (cycle=="12_2"): |
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| 331 | instver="new2" |
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| 332 | calfile="P:\Mantid\\Calibration\\pearl_offset_12_2.cal" |
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| 333 | vabsorbfile="P:\Mantid\\Calibration\\pearl_absorp_sphere_10mm_newinst2_long.nxs" |
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| 334 | |
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| 335 | if (tt_mode=="TT88"): |
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| 336 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT88.cal" |
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| 337 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_12_2.nxs" |
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| 338 | elif (tt_mode=="TT70"): |
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| 339 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT70.cal" |
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| 340 | vanfile="P:\Mantid\\Calibration\\van_spline_TT70_cycle_12_2.nxs" |
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| 341 | elif (tt_mode=="TT35"): |
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| 342 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT35.cal" |
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| 343 | vanfile="P:\Mantid\\Calibration\\van_spline_TT35_cycle_12_2.nxs" |
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| 344 | else: |
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| 345 | print "Sorry I don't know that Two Theta mode so assuming T88" |
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| 346 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT88.cal" |
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| 347 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_12_2.nxs" |
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| 348 | elif (cycle=="12_1"): |
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| 349 | instver="new2" |
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| 350 | calfile="P:\Mantid\\Calibration\\pearl_offset_12_1.cal" |
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| 351 | vabsorbfile="P:\Mantid\\Calibration\\pearl_absorp_sphere_10mm_newinst2_long.nxs" |
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| 352 | |
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| 353 | if (tt_mode=="TT88"): |
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| 354 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT88.cal" |
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| 355 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_12_1.nxs" |
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| 356 | elif (tt_mode=="TT70"): |
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| 357 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT70.cal" |
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| 358 | vanfile="P:\Mantid\\Calibration\\van_spline_TT70_cycle_12_1.nxs" |
|---|
| 359 | elif (tt_mode=="TT35"): |
|---|
| 360 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT35.cal" |
|---|
| 361 | vanfile="P:\Mantid\\Calibration\\van_spline_TT35_cycle_12_1.nxs" |
|---|
| 362 | else: |
|---|
| 363 | print "Sorry I don't know that Two Theta mode so assuming T88" |
|---|
| 364 | groupfile="P:\Mantid\\Calibration\\pearl_group_12_1_TT88.cal" |
|---|
| 365 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_12_1.nxs" |
|---|
| 366 | elif (cycle=="11_5"): |
|---|
| 367 | instver="new" |
|---|
| 368 | calfile="P:\Mantid\\Calibration\\pearl_offset_11_5.cal" |
|---|
| 369 | vabsorbfile="P:\Mantid\\Calibration\\pearl_absorp_sphere_10mm_newinst_long.nxs" |
|---|
| 370 | |
|---|
| 371 | if (tt_mode=="TT88"): |
|---|
| 372 | groupfile="P:\Mantid\\Calibration\\pearl_group_11_2_TT88.cal" |
|---|
| 373 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_11_5.nxs" |
|---|
| 374 | elif (tt_mode=="TT70"): |
|---|
| 375 | groupfile="P:\Mantid\\Calibration\\pearl_group_11_2_TT70.cal" |
|---|
| 376 | vanfile="P:\Mantid\\Calibration\\van_spline_TT70_cycle_11_5.nxs" |
|---|
| 377 | elif (tt_mode=="TT35"): |
|---|
| 378 | groupfile="P:\Mantid\\Calibration\\pearl_group_11_2_TT35.cal" |
|---|
| 379 | vanfile="P:\Mantid\\Calibration\\van_spline_TT35_cycle_11_5.nxs" |
|---|
| 380 | else: |
|---|
| 381 | print "Sorry I don't know that Two Theta mode so assuming T88" |
|---|
| 382 | groupfile="P:\Mantid\\Calibration\\pearl_group_11_2_TT88.cal" |
|---|
| 383 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_11_5.nxs" |
|---|
| 384 | elif (cycle=="11_4"): |
|---|
| 385 | instver="new" |
|---|
| 386 | calfile="P:\Mantid\\Calibration\\pearl_offset_11_4.cal" |
|---|
| 387 | vabsorbfile="P:\Mantid\\Calibration\\pearl_absorp_sphere_10mm_newinst_long.nxs" |
|---|
| 388 | |
|---|
| 389 | if (tt_mode=="TT88"): |
|---|
| 390 | groupfile="P:\Mantid\\Calibration\\pearl_group_11_2_TT88.cal" |
|---|
| 391 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_11_4.nxs" |
|---|
| 392 | elif (tt_mode=="TT70"): |
|---|
| 393 | groupfile="P:\Mantid\\Calibration\\pearl_group_11_2_TT70.cal" |
|---|
| 394 | vanfile="P:\Mantid\\Calibration\\van_spline_TT70_cycle_11_4.nxs" |
|---|
| 395 | elif (tt_mode=="TT35"): |
|---|
| 396 | groupfile="P:\Mantid\\Calibration\\pearl_group_11_2_TT35.cal" |
|---|
| 397 | vanfile="P:\Mantid\\Calibration\\van_spline_TT35_cycle_11_4.nxs" |
|---|
| 398 | else: |
|---|
| 399 | print "Sorry I don't know that Two Theta mode so assuming T88" |
|---|
| 400 | groupfile="P:\Mantid\\Calibration\\pearl_group_11_2_TT88.cal" |
|---|
| 401 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_11_4.nxs" |
|---|
| 402 | elif (cycle=="11_3"): |
|---|
| 403 | instver="new" |
|---|
| 404 | calfile="P:\Mantid\\Calibration\\pearl_offset_11_3.cal" |
|---|
| 405 | vabsorbfile="P:\Mantid\\Calibration\\pearl_absorp_sphere_10mm_newinst_long.nxs" |
|---|
| 406 | |
|---|
| 407 | if (tt_mode=="TT88"): |
|---|
| 408 | groupfile="P:\Mantid\\Calibration\\pearl_group_11_2_TT88.cal" |
|---|
| 409 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_11_3.nxs" |
|---|
| 410 | elif (tt_mode=="TT70"): |
|---|
| 411 | groupfile="P:\Mantid\\Calibration\\pearl_group_11_2_TT70.cal" |
|---|
| 412 | vanfile="P:\Mantid\\Calibration\\van_spline_TT70_cycle_11_3.nxs" |
|---|
| 413 | elif (tt_mode=="TT35"): |
|---|
| 414 | groupfile="P:\Mantid\\Calibration\\pearl_group_11_2_TT35.cal" |
|---|
| 415 | vanfile="P:\Mantid\\Calibration\\van_spline_TT35_cycle_11_3.nxs" |
|---|
| 416 | else: |
|---|
| 417 | print "Sorry I don't know that Two Theta mode so assuming T88" |
|---|
| 418 | groupfile="P:\Mantid\\Calibration\\pearl_group_11_2_TT88.cal" |
|---|
| 419 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_11_3.nxs" |
|---|
| 420 | elif (cycle=="11_2"): |
|---|
| 421 | instver="new" |
|---|
| 422 | calfile="P:\Mantid\\Calibration\\pearl_offset_11_2.cal" |
|---|
| 423 | vabsorbfile="P:\Mantid\\Calibration\\pearl_absorp_sphere_10mm_newinst.nxs" |
|---|
| 424 | vanfile="P:\Mantid\\Calibration\\van_spline_mods_cycle_11_2.nxs" |
|---|
| 425 | if (tt_mode=="TT88"): |
|---|
| 426 | groupfile="P:\Mantid\\Calibration\\pearl_group_11_2_TT88.cal" |
|---|
| 427 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_11_2.nxs" |
|---|
| 428 | elif (tt_mode=="TT70"): |
|---|
| 429 | groupfile="P:\Mantid\\Calibration\\pearl_group_11_2_TT70.cal" |
|---|
| 430 | vanfile="P:\Mantid\\Calibration\\van_spline_TT70_cycle_11_2.nxs" |
|---|
| 431 | elif (tt_mode=="TT35"): |
|---|
| 432 | groupfile="P:\Mantid\\Calibration\\pearl_group_11_2_TT35.cal" |
|---|
| 433 | vanfile="P:\Mantid\\Calibration\\van_spline_TT35_cycle_11_2.nxs" |
|---|
| 434 | else: |
|---|
| 435 | print "Sorry I don't know that Two Theta mode so assuming T88" |
|---|
| 436 | groupfile="P:\Mantid\\Calibration\\pearl_group_11_2_TT88.cal" |
|---|
| 437 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_11_2.nxs" |
|---|
| 438 | elif (cycle=="11_1"): |
|---|
| 439 | instver="new" |
|---|
| 440 | calfile="P:\Mantid\\Calibration\\pearl_offset_11_2.cal" |
|---|
| 441 | vabsorbfile="P:\Mantid\\Calibration\\pearl_absorp_sphere_10mm_newinst_11_1.nxs" |
|---|
| 442 | vanfile="P:\Mantid\\Calibration\\van_spline_mods_cycle_11_1.nxs" |
|---|
| 443 | if (tt_mode=="TT88"): |
|---|
| 444 | groupfile="P:\Mantid\\Calibration\\pearl_group_11_2_TT88.cal" |
|---|
| 445 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_11_1.nxs" |
|---|
| 446 | elif (tt_mode=="TT70"): |
|---|
| 447 | groupfile="P:\Mantid\\Calibration\\pearl_group_11_2_TT70.cal" |
|---|
| 448 | vanfile="P:\Mantid\\Calibration\\van_spline_TT70_cycle_11_1.nxs" |
|---|
| 449 | elif (tt_mode=="TT35"): |
|---|
| 450 | groupfile="P:\Mantid\\Calibration\\pearl_group_11_2_TT35.cal" |
|---|
| 451 | vanfile="P:\Mantid\\Calibration\\van_spline_TT35_cycle_11_1.nxs" |
|---|
| 452 | else: |
|---|
| 453 | print "Sorry I don't know that Two Theta mode so assuming T88" |
|---|
| 454 | groupfile="P:\Mantid\\Calibration\\pearl_group_11_2_TT88.cal" |
|---|
| 455 | vanfile="P:\Mantid\\Calibration\\van_spline_TT88_cycle_11_1.nxs" |
|---|
| 456 | elif (cycle=="10_2"): |
|---|
| 457 | instver="old" |
|---|
| 458 | calfile="P:\Mantid\\Calibration\\pearl_offset_10_2.cal" |
|---|
| 459 | groupfile="P:\Mantid\\Calibration\\pearl_group_10_2.cal" |
|---|
| 460 | vabsorbfile="P:\Mantid\\Calibration\\pearl_absorp_sphere_10mm_all.nxs" |
|---|
| 461 | vanfile="P:\Mantid\\Calibration\\test_van_new_cycle_10_2.nxs" |
|---|
| 462 | else: |
|---|
| 463 | print "Sorry that cycle has not been defined yet" |
|---|
| 464 | return |
|---|
| 465 | |
|---|
| 466 | def PEARL_setdatadir(directory="C:\PEARL\RAW\\"): |
|---|
| 467 | global pearl_datadir |
|---|
| 468 | pearl_datadir=directory |
|---|
| 469 | return |
|---|
| 470 | |
|---|
| 471 | def PEARL_setattenfile(new_atten="P:\Mantid\\Attentuation\\PRL985_WC_HOYBIDE_NK_10MM_FF.OUT"): |
|---|
| 472 | global attenfile |
|---|
| 473 | attenfile=new_atten |
|---|
| 474 | print "Set attenuation file to ",attenfile |
|---|
| 475 | return |
|---|
| 476 | |
|---|
| 477 | def PEARL_datadir(): |
|---|
| 478 | return pearl_datadir |
|---|
| 479 | |
|---|
| 480 | def PEARL_getfilename(run_number,ext): |
|---|
| 481 | global livedatadir |
|---|
| 482 | |
|---|
| 483 | if (ext[0]!='s'): |
|---|
| 484 | data_dir=PEARL_datadir() |
|---|
| 485 | else: |
|---|
| 486 | data_dir=livedatadir |
|---|
| 487 | digit=len(str(run_number)) |
|---|
| 488 | |
|---|
| 489 | if (run_number < 71009): |
|---|
| 490 | numdigits=5 |
|---|
| 491 | # |
|---|
| 492 | # filename=data_dir+"PRL" |
|---|
| 493 | # |
|---|
| 494 | filename="PRL" |
|---|
| 495 | else: |
|---|
| 496 | numdigits=8 |
|---|
| 497 | # |
|---|
| 498 | # filename=data_dir+"PEARL" |
|---|
| 499 | # |
|---|
| 500 | filename="PEARL" |
|---|
| 501 | |
|---|
| 502 | for i in range(0,numdigits-digit): |
|---|
| 503 | filename=filename+"0" |
|---|
| 504 | |
|---|
| 505 | filename+=str(run_number)+"."+ext |
|---|
| 506 | |
|---|
| 507 | full_filename=filename |
|---|
| 508 | # |
|---|
| 509 | # Check if file exists in default data folder & if not use alternate folder stored in "datadir"... |
|---|
| 510 | # |
|---|
| 511 | #if (os.path.exists(full_filename) == False): |
|---|
| 512 | |
|---|
| 513 | # print "No such file as ",full_filename,"; trying X-drive folder..." |
|---|
| 514 | |
|---|
| 515 | # full_filename=datadir+filename |
|---|
| 516 | |
|---|
| 517 | return full_filename |
|---|
| 518 | |
|---|
| 519 | def PearlLoad(files,ext,outname): |
|---|
| 520 | |
|---|
| 521 | if type(files) is int: |
|---|
| 522 | infile=PEARL_getfilename(files,ext) |
|---|
| 523 | print "loading ",infile,"into ",outname |
|---|
| 524 | print "--DEBUGGING: ",LoadRaw.func_code.co_filename |
|---|
| 525 | LoadRaw(Filename=infile,OutputWorkspace=outname,LoadLogFiles="0") |
|---|
| 526 | else: |
|---|
| 527 | loop=0 |
|---|
| 528 | num=files.split("_") |
|---|
| 529 | frange=range(int(num[0]),int(num[1])+1) |
|---|
| 530 | for i in frange: |
|---|
| 531 | infile=PEARL_getfilename(i,ext) |
|---|
| 532 | print "loading ",infile |
|---|
| 533 | outwork="run"+str(i) |
|---|
| 534 | LoadRaw(Filename=infile,OutputWorkspace=outwork,LoadLogFiles="0") |
|---|
| 535 | loop=loop+1 |
|---|
| 536 | if loop == 2: |
|---|
| 537 | firstwk="run"+str(i-1) |
|---|
| 538 | secondwk="run"+str(i) |
|---|
| 539 | Plus(LHSWorkspace=firstwk,RHSWorkspace=secondwk,OutputWorkspace=outname) |
|---|
| 540 | mtd.remove(firstwk) |
|---|
| 541 | mtd.remove(secondwk) |
|---|
| 542 | elif loop > 2: |
|---|
| 543 | secondwk="run"+str(i) |
|---|
| 544 | Plus(LHSWorkspace=outname,RHSWorkspace=secondwk,OutputWorkspace=outname) |
|---|
| 545 | mtd.remove(secondwk) |
|---|
| 546 | return |
|---|
| 547 | |
|---|
| 548 | def PearlLoadMon(files,ext,outname): |
|---|
| 549 | |
|---|
| 550 | if type(files) is int: |
|---|
| 551 | infile=PEARL_getfilename(files,ext) |
|---|
| 552 | mspectra=PEARL_getmonitorspectrum(files) |
|---|
| 553 | print "loading ",infile,"into ",outname |
|---|
| 554 | LoadRaw(Filename=infile,OutputWorkspace=outname,SpectrumMin=mspectra,SpectrumMax=mspectra,LoadLogFiles="0") |
|---|
| 555 | else: |
|---|
| 556 | loop=0 |
|---|
| 557 | num=files.split("_") |
|---|
| 558 | frange=range(int(num[0]),int(num[1])+1) |
|---|
| 559 | mspectra=PEARL_getmonitorspectrum(int(num[0])) |
|---|
| 560 | for i in frange: |
|---|
| 561 | infile=PEARL_getfilename(i,ext) |
|---|
| 562 | print "loading ",infile |
|---|
| 563 | outwork="mon"+str(i) |
|---|
| 564 | LoadRaw(Filename=infile,OutputWorkspace=outwork,SpectrumMin=mspectra,SpectrumMax=mspectra,LoadLogFiles="0") |
|---|
| 565 | loop=loop+1 |
|---|
| 566 | if loop == 2: |
|---|
| 567 | firstwk="mon"+str(i-1) |
|---|
| 568 | secondwk="mon"+str(i) |
|---|
| 569 | Plus(LHSWorkspace=firstwk,RHSWorkspace=secondwk,OutputWorkspace=outname) |
|---|
| 570 | mtd.remove(firstwk) |
|---|
| 571 | mtd.remove(secondwk) |
|---|
| 572 | elif loop > 2: |
|---|
| 573 | secondwk="mon"+str(i) |
|---|
| 574 | Plus(LHSWorkspace=outname,RHSWorkspace=secondwk,OutputWorkspace=outname) |
|---|
| 575 | mtd.remove(secondwk) |
|---|
| 576 | return |
|---|
| 577 | |
|---|
| 578 | |
|---|
| 579 | |
|---|
| 580 | def PEARL_getmonitor(number,ext,spline_terms=20,debug=False): |
|---|
| 581 | |
|---|
| 582 | works="monitor"+str(number) |
|---|
| 583 | PearlLoadMon(number,ext,works) |
|---|
| 584 | ConvertUnits(InputWorkspace=works,OutputWorkspace=works,Target="Wavelength") |
|---|
| 585 | lmin,lmax=PEARL_getlambdarange() |
|---|
| 586 | CropWorkspace(InputWorkspace=works,OutputWorkspace=works,XMin=lmin,XMax=lmax) |
|---|
| 587 | ex_regions=n.zeros((2,4)) |
|---|
| 588 | ex_regions[:,0]=[3.45,3.7] |
|---|
| 589 | ex_regions[:,1]=[2.96,3.2] |
|---|
| 590 | ex_regions[:,2]=[2.1,2.26] |
|---|
| 591 | ex_regions[:,3]=[1.73,1.98] |
|---|
| 592 | #ConvertToDistribution(works) |
|---|
| 593 | if (debug): |
|---|
| 594 | print "The masked regions are" |
|---|
| 595 | for i in range(0,4): |
|---|
| 596 | print ex_regions[0,i],ex_regions[1,i] |
|---|
| 597 | #x,y,z=mtdplt.getnarray(works,0) |
|---|
| 598 | #p.plot(x,y) |
|---|
| 599 | |
|---|
| 600 | for reg in range(0,4): |
|---|
| 601 | MaskBins(InputWorkspace=works,OutputWorkspace=works,XMin=ex_regions[0,reg],XMax=ex_regions[1,reg]) |
|---|
| 602 | |
|---|
| 603 | if (debug): |
|---|
| 604 | CloneWorkspace(InputWorkspace=works,OutputWorkspace="mask") |
|---|
| 605 | #x,y,z=mtdplt.getnarray(works,0) |
|---|
| 606 | #p.plot(x,y) |
|---|
| 607 | SplineBackground(InputWorkspace=works,OutputWorkspace=works,WorkspaceIndex=0,NCoeff=spline_terms) |
|---|
| 608 | #if (debug): |
|---|
| 609 | #x,y,z=mtdplt.getnarray(works,0) |
|---|
| 610 | #p.plot(x,y) |
|---|
| 611 | #p.show() |
|---|
| 612 | #SmoothData(works,works,50) |
|---|
| 613 | #ConvertFromDistribution(works) |
|---|
| 614 | return works |
|---|
| 615 | |
|---|
| 616 | |
|---|
| 617 | def PEARL_read(number,ext,outname): |
|---|
| 618 | PearlLoad(number,ext,outname) |
|---|
| 619 | ConvertUnits(InputWorkspace=outname,OutputWorkspace=outname,Target="Wavelength") |
|---|
| 620 | #lmin,lmax=WISH_getlambdarange() |
|---|
| 621 | #CropWorkspace(output,output,XMin=lmin,XMax=lmax) |
|---|
| 622 | monitor=PEARL_getmonitor(number,ext,spline_terms=20,debug=False) |
|---|
| 623 | #NormaliseToMonitor(InputWorkspace=outname,OutputWorkspace=outname,MonitorWorkspace=monitor) |
|---|
| 624 | NormaliseToMonitor(InputWorkspace=outname,OutputWorkspace=outname,MonitorWorkspace=monitor,IntegrationRangeMin=0.6,IntegrationRangeMax=5.0) |
|---|
| 625 | ConvertUnits(InputWorkspace=outname,OutputWorkspace=outname,Target="TOF") |
|---|
| 626 | mtd.remove(monitor) |
|---|
| 627 | #ReplaceSpecialValues(output,output,NaNValue=0.0,NaNError=0.0,InfinityValue=0.0,InfinityError=0.0) |
|---|
| 628 | return |
|---|
| 629 | |
|---|
| 630 | def PEARL_align(work,focus): |
|---|
| 631 | PEARL_getcalibfiles() |
|---|
| 632 | AlignDetectors(InputWorkspace=work,OutputWorkspace=work,CalibrationFile=calfile) |
|---|
| 633 | #mtd.remove(work) |
|---|
| 634 | return focus |
|---|
| 635 | |
|---|
| 636 | def PEARL_focus(number,ext="raw",fmode="trans",ttmode="TT70",atten=True,van_norm=True,debug=False): |
|---|
| 637 | global instver |
|---|
| 638 | |
|---|
| 639 | PEARL_getcycle(number) |
|---|
| 640 | |
|---|
| 641 | print "Instrument version is:",instver |
|---|
| 642 | if (instver=="new2"): |
|---|
| 643 | outwork=PEARL_focus_v2(number,ext,fmode,ttmode,atten,van_norm,debug) |
|---|
| 644 | else: |
|---|
| 645 | outwork=PEARL_focus_v1(number,ext,fmode,ttmode,atten,van_norm,debug) |
|---|
| 646 | |
|---|
| 647 | |
|---|
| 648 | return outwork |
|---|
| 649 | |
|---|
| 650 | def PEARL_focus_v1(number,ext="raw",fmode="trans",ttmode="TT70",atten=True,van_norm=True,debug=False): |
|---|
| 651 | |
|---|
| 652 | global mode |
|---|
| 653 | global tt_mode |
|---|
| 654 | tt_mode=ttmode |
|---|
| 655 | mode=fmode |
|---|
| 656 | PEARL_getcycle(number) |
|---|
| 657 | PEARL_getcalibfiles() |
|---|
| 658 | print "Focussing mode is:",mode |
|---|
| 659 | print "Two theta mode is:",tt_mode |
|---|
| 660 | print "Group file is", groupfile |
|---|
| 661 | print "Calibration file is", calfile |
|---|
| 662 | print "Tof binning", tofbinning |
|---|
| 663 | work="work" |
|---|
| 664 | focus="focus" |
|---|
| 665 | if type(number) is int: |
|---|
| 666 | outfile=userdataprocessed+"PRL"+str(number)+".nxs" |
|---|
| 667 | gssfile=userdataprocessed+"PRL"+str(number)+".gss" |
|---|
| 668 | tof_xye_file=userdataprocessed+"PRL"+str(number)+"_tof_xye.dat" |
|---|
| 669 | d_xye_file=userdataprocessed+"PRL"+str(number)+"_d_xye.dat" |
|---|
| 670 | outwork="PRL"+str(number) |
|---|
| 671 | else: |
|---|
| 672 | outfile=userdataprocessed+"PRL"+number+".nxs" |
|---|
| 673 | gssfile=userdataprocessed+"PRL"+number+".gss" |
|---|
| 674 | tof_xye_file=userdataprocessed+"PRL"+number+"_tof_xye.dat" |
|---|
| 675 | d_xye_file=userdataprocessed+"PRL"+number+"_d_xye.dat" |
|---|
| 676 | |
|---|
| 677 | outwork="PRL"+number |
|---|
| 678 | |
|---|
| 679 | PEARL_read(number,ext,work) |
|---|
| 680 | Rebin(InputWorkspace=work,OutputWorkspace=work,Params=tofbinning) |
|---|
| 681 | AlignDetectors(InputWorkspace=work,OutputWorkspace=work,CalibrationFile=calfile) |
|---|
| 682 | DiffractionFocussing(InputWorkspace=work,OutputWorkspace=focus,GroupingFileName=groupfile) |
|---|
| 683 | |
|---|
| 684 | |
|---|
| 685 | |
|---|
| 686 | if (debug!=True): |
|---|
| 687 | mtd.remove(work) |
|---|
| 688 | |
|---|
| 689 | for i in range(0,12): |
|---|
| 690 | output="mod"+str(i+1) |
|---|
| 691 | van="van"+str(i+1) |
|---|
| 692 | rdata="rdata"+str(i+1) |
|---|
| 693 | if (van_norm): |
|---|
| 694 | print "Using vanadium file",vanfile |
|---|
| 695 | LoadNexus(Filename=vanfile,OutputWorkspace=van,EntryNumber=i+1) |
|---|
| 696 | ExtractSingleSpectrum(InputWorkspace=focus,OutputWorkspace=rdata,WorkspaceIndex=i) |
|---|
| 697 | #ConvertUnits(van,van,"TOF") |
|---|
| 698 | Rebin(InputWorkspace=van,OutputWorkspace=van,Params=tofbinning) |
|---|
| 699 | ConvertUnits(InputWorkspace=rdata,OutputWorkspace=rdata,Target="TOF") |
|---|
| 700 | Rebin(InputWorkspace=rdata,OutputWorkspace=rdata,Params=tofbinning) |
|---|
| 701 | Divide(LHSWorkspace=rdata,RHSWorkspace=van,OutputWorkspace=output) |
|---|
| 702 | CropWorkspace(InputWorkspace=output,OutputWorkspace=output,XMin=0.1) |
|---|
| 703 | Scale(InputWorkspace=output,OutputWorkspace=output,Factor=10) |
|---|
| 704 | else: |
|---|
| 705 | print "Not Using vanadium file" |
|---|
| 706 | #LoadNexus(Filename=vanfile,OutputWorkspace=van,EntryNumber=i+1) |
|---|
| 707 | ExtractSingleSpectrum(InputWorkspace=focus,OutputWorkspace=rdata,WorkspaceIndex=i) |
|---|
| 708 | #ConvertUnits(van,van,"TOF") |
|---|
| 709 | #Rebin(van,van,tofbinning) |
|---|
| 710 | ConvertUnits(InputWorkspace=rdata,OutputWorkspace=rdata,Target="TOF") |
|---|
| 711 | Rebin(InputWorkspace=rdata,OutputWorkspace=output,Params=tofbinning) |
|---|
| 712 | #Divide(rdata,van,output) |
|---|
| 713 | CropWorkspace(InputWorkspace=output,OutputWorkspace=output,XMin=0.1) |
|---|
| 714 | if (debug!=True): |
|---|
| 715 | mtd.remove(focus) |
|---|
| 716 | |
|---|
| 717 | if (mode=="all"): |
|---|
| 718 | CloneWorkspace(InputWorkspace="mod1",OutputWorkspace="bank1") |
|---|
| 719 | for i in range(1,9): |
|---|
| 720 | toadd="mod"+str(i+1) |
|---|
| 721 | Plus(LHSWorkspace="bank1",RHSWorkspace=toadd,OutputWorkspace="bank1") |
|---|
| 722 | Scale(InputWorkspace="bank1",OutputWorkspace="bank1",Factor=0.111111111111111) |
|---|
| 723 | SaveGSS(InputWorkspace="bank1",Filename=gssfile,Append=False,Bank=1) |
|---|
| 724 | ConvertUnits(InputWorkspace="bank1",OutputWorkspace="bank1",Target="dSpacing") |
|---|
| 725 | SaveNexus(Filename=outfile,InputWorkspace="bank1",Append=False) |
|---|
| 726 | for i in range(0,3): |
|---|
| 727 | tosave="mod"+str(i+10) |
|---|
| 728 | SaveGSS(InputWorkspace=tosave,Filename=gssfile,Append=True,Bank=i+2) |
|---|
| 729 | ConvertUnits(InputWorkspace=tosave,OutputWorkspace=tosave,Target="dSpacing") |
|---|
| 730 | SaveNexus(Filename=outfile,InputWorkspace=tosave,Append=True) |
|---|
| 731 | |
|---|
| 732 | if (debug!=True): |
|---|
| 733 | for i in range(0,12): |
|---|
| 734 | output="mod"+str(i+1) |
|---|
| 735 | van="van"+str(i+1) |
|---|
| 736 | rdata="rdata"+str(i+1) |
|---|
| 737 | mtd.remove(rdata) |
|---|
| 738 | mtd.remove(van) |
|---|
| 739 | mtd.remove(output) |
|---|
| 740 | mtd.remove("bank1") |
|---|
| 741 | |
|---|
| 742 | elif (mode=="groups"): |
|---|
| 743 | CloneWorkspace(InputWorkspace="mod1",OutputWorkspace="group1") |
|---|
| 744 | CloneWorkspace(InputWorkspace="mod4",OutputWorkspace="group2") |
|---|
| 745 | CloneWorkspace(InputWorkspace="mod7",OutputWorkspace="group3") |
|---|
| 746 | for i in range(1,3): |
|---|
| 747 | toadd="mod"+str(i+1) |
|---|
| 748 | Plus(LHSWorkspace="group1",RHSWorkspace=toadd,OutputWorkspace="group1") |
|---|
| 749 | Scale(InputWorkspace="group1",OutputWorkspace="group1",Factor=0.333333333333) |
|---|
| 750 | for i in range(1,3): |
|---|
| 751 | toadd="mod"+str(i+4) |
|---|
| 752 | Plus(LHSWorkspace="group2",RHSWorkspace=toadd,OutputWorkspace="group2") |
|---|
| 753 | Scale(InputWorkspace="group2",OutputWorkspace="group2",Factor=0.333333333333) |
|---|
| 754 | for i in range(1,3): |
|---|
| 755 | toadd="mod"+str(i+7) |
|---|
| 756 | Plus(LHSWorkspace="group3",RHSWorkspace=toadd,OutputWorkspace="group3") |
|---|
| 757 | Scale(InputWorkspace="group3",OutputWorkspace="group3",Factor=0.333333333333) |
|---|
| 758 | Plus(LHSWorkspace="group2",RHSWorkspace="group3",OutputWorkspace="group23") |
|---|
| 759 | Scale(InputWorkspace="group23",OutputWorkspace="group23",Factor=0.5) |
|---|
| 760 | SaveGSS(InputWorkspace="group1",Filename=gssfile,Append=False,Bank=1) |
|---|
| 761 | ConvertUnits(InputWorkspace="group1",OutputWorkspace="group1",Target="dSpacing") |
|---|
| 762 | SaveNexus(Filename=outfile,InputWorkspace="group1",Append=False) |
|---|
| 763 | SaveGSS(InputWorkspace="group2",Filename=gssfile,Append=True,Bank=2) |
|---|
| 764 | ConvertUnits(InputWorkspace="group2",OutputWorkspace="group2",Target="dSpacing") |
|---|
| 765 | SaveNexus(Filename=outfile,InputWorkspace="group2",Append=True) |
|---|
| 766 | SaveGSS(InputWorkspace="group3",Filename=gssfile,Append=True,Bank=3) |
|---|
| 767 | ConvertUnits(InputWorkspace="group3",OutputWorkspace="group3",Target="dSpacing") |
|---|
| 768 | SaveNexus(Filename=outfile,InputWorkspace="group3",Append=True) |
|---|
| 769 | SaveGSS(InputWorkspace="group23",Filename=gssfile,Append=True,Bank=4) |
|---|
| 770 | ConvertUnits(InputWorkspace="group23",OutputWorkspace="group23",Target="dSpacing") |
|---|
| 771 | SaveNexus(Filename=outfile,InputWorkspace="group23",Append=True) |
|---|
| 772 | for i in range(0,3): |
|---|
| 773 | tosave="mod"+str(i+10) |
|---|
| 774 | SaveGSS(InputWorkspace=tosave,Filename=gssfile,Append=True,Bank=i+5) |
|---|
| 775 | ConvertUnits(InputWorkspace=tosave,OutputWorkspace=tosave,Target="dSpacing") |
|---|
| 776 | SaveNexus(Filename=outfile,InputWorkspace=tosave,Append=True) |
|---|
| 777 | if (debug!=True): |
|---|
| 778 | for i in range(0,12): |
|---|
| 779 | output="mod"+str(i+1) |
|---|
| 780 | van="van"+str(i+1) |
|---|
| 781 | rdata="rdata"+str(i+1) |
|---|
| 782 | mtd.remove(rdata) |
|---|
| 783 | mtd.remove(van) |
|---|
| 784 | mtd.remove(output) |
|---|
| 785 | mtd.remove("group1") |
|---|
| 786 | mtd.remove("group2") |
|---|
| 787 | mtd.remove("group3") |
|---|
| 788 | mtd.remove("group23") |
|---|
| 789 | |
|---|
| 790 | elif (mode=="trans"): |
|---|
| 791 | CloneWorkspace(InputWorkspace="mod1",OutputWorkspace="bank1") |
|---|
| 792 | for i in range(1,9): |
|---|
| 793 | toadd="mod"+str(i+1) |
|---|
| 794 | Plus(LHSWorkspace="bank1",RHSWorkspace=toadd,OutputWorkspace="bank1") |
|---|
| 795 | Scale(InputWorkspace="bank1",OutputWorkspace="bank1",Factor=0.111111111111111) |
|---|
| 796 | if (atten): |
|---|
| 797 | ConvertUnits(InputWorkspace="bank1",OutputWorkspace="bank1",Target="dSpacing") |
|---|
| 798 | CloneWorkspace(InputWorkspace="bank1",OutputWorkspace=outwork+"_noatten") |
|---|
| 799 | PEARL_atten("bank1","bank1") |
|---|
| 800 | ConvertUnits(InputWorkspace="bank1",OutputWorkspace="bank1",Target="TOF") |
|---|
| 801 | |
|---|
| 802 | SaveGSS(InputWorkspace="bank1",Filename=gssfile,Append=False,Bank=1) |
|---|
| 803 | |
|---|
| 804 | SaveFocusedXYE(InputWorkspace="bank1",Filename=tof_xye_file,Append=False,IncludeHeader=False) |
|---|
| 805 | ConvertUnits(InputWorkspace="bank1",OutputWorkspace="bank1",Target="dSpacing") |
|---|
| 806 | SaveFocusedXYE(InputWorkspace="bank1",Filename=d_xye_file,Append=False,IncludeHeader=False) |
|---|
| 807 | SaveNexus(Filename=outfile,InputWorkspace="bank1",Append=False) |
|---|
| 808 | |
|---|
| 809 | for i in range(0,9): |
|---|
| 810 | tosave="mod"+str(i+1) |
|---|
| 811 | #SaveGSS(tosave,Filename=gssfile,Append=True,Bank=i+2) |
|---|
| 812 | ConvertUnits(InputWorkspace=tosave,OutputWorkspace=tosave,Target="dSpacing") |
|---|
| 813 | SaveNexus(Filename=outfile,InputWorkspace=tosave,Append=True) |
|---|
| 814 | |
|---|
| 815 | if (debug!=True): |
|---|
| 816 | for i in range(0,12): |
|---|
| 817 | output="mod"+str(i+1) |
|---|
| 818 | van="van"+str(i+1) |
|---|
| 819 | rdata="rdata"+str(i+1) |
|---|
| 820 | mtd.remove(rdata) |
|---|
| 821 | mtd.remove(van) |
|---|
| 822 | mtd.remove(output) |
|---|
| 823 | mtd.remove("bank1") |
|---|
| 824 | |
|---|
| 825 | elif (mode=="mods"): |
|---|
| 826 | for i in range(0,12): |
|---|
| 827 | output="mod"+str(i+1) |
|---|
| 828 | van="van"+str(i+1) |
|---|
| 829 | rdata="rdata"+str(i+1) |
|---|
| 830 | if (i==0): |
|---|
| 831 | SaveGSS(InputWorkspace=output,Filename=gssfile,Append=False,Bank=i+1) |
|---|
| 832 | ConvertUnits(InputWorkspace=output,OutputWorkspace=output,Target="dSpacing") |
|---|
| 833 | SaveNexus(Filename=outfile,InputWorkspace=output,Append=False) |
|---|
| 834 | else: |
|---|
| 835 | SaveGSS(InputWorkspace=output,Filename=gssfile,Append=True,Bank=i+1) |
|---|
| 836 | ConvertUnits(InputWorkspace=output,OutputWorkspace=output,Target="dSpacing") |
|---|
| 837 | SaveNexus(Filename=outfile,InputWorkspace=output,Append=True) |
|---|
| 838 | if (debug!=True): |
|---|
| 839 | mtd.remove(rdata) |
|---|
| 840 | mtd.remove(van) |
|---|
| 841 | mtd.remove(output) |
|---|
| 842 | |
|---|
| 843 | else: |
|---|
| 844 | print "Sorry I don't know that mode", mode |
|---|
| 845 | return |
|---|
| 846 | |
|---|
| 847 | LoadNexus(Filename=outfile,OutputWorkspace=outwork) |
|---|
| 848 | return outwork |
|---|
| 849 | |
|---|
| 850 | def PEARL_focus_v2(number,ext="raw",fmode="trans",ttmode="TT70",atten=True,van_norm=True,debug=False): |
|---|
| 851 | |
|---|
| 852 | global mode |
|---|
| 853 | global tt_mode |
|---|
| 854 | tt_mode=ttmode |
|---|
| 855 | mode=fmode |
|---|
| 856 | PEARL_getcycle(number) |
|---|
| 857 | PEARL_getcalibfiles() |
|---|
| 858 | print "Focussing mode is:",mode |
|---|
| 859 | print "Two theta mode is:",tt_mode |
|---|
| 860 | print "Group file is", groupfile |
|---|
| 861 | print "Calibration file is", calfile |
|---|
| 862 | print "Tof binning", tofbinning |
|---|
| 863 | work="work" |
|---|
| 864 | focus="focus" |
|---|
| 865 | if type(number) is int: |
|---|
| 866 | outfile=userdataprocessed+"PRL"+str(number)+".nxs" |
|---|
| 867 | gssfile=userdataprocessed+"PRL"+str(number)+".gss" |
|---|
| 868 | tof_xye_file=userdataprocessed+"PRL"+str(number)+"_tof_xye.dat" |
|---|
| 869 | d_xye_file=userdataprocessed+"PRL"+str(number)+"_d_xye.dat" |
|---|
| 870 | outwork="PRL"+str(number) |
|---|
| 871 | else: |
|---|
| 872 | outfile=userdataprocessed+"PRL"+number+".nxs" |
|---|
| 873 | gssfile=userdataprocessed+"PRL"+number+".gss" |
|---|
| 874 | tof_xye_file=userdataprocessed+"PRL"+number+"_tof_xye.dat" |
|---|
| 875 | d_xye_file=userdataprocessed+"PRL"+number+"_d_xye.dat" |
|---|
| 876 | |
|---|
| 877 | outwork="PRL"+number |
|---|
| 878 | |
|---|
| 879 | PEARL_read(number,ext,work) |
|---|
| 880 | Rebin(InputWorkspace=work,OutputWorkspace=work,Params=tofbinning) |
|---|
| 881 | AlignDetectors(InputWorkspace=work,OutputWorkspace=work,CalibrationFile=calfile) |
|---|
| 882 | DiffractionFocussing(InputWorkspace=work,OutputWorkspace=focus,GroupingFileName=groupfile) |
|---|
| 883 | |
|---|
| 884 | |
|---|
| 885 | |
|---|
| 886 | if (debug!=True): |
|---|
| 887 | mtd.remove(work) |
|---|
| 888 | |
|---|
| 889 | for i in range(0,14): |
|---|
| 890 | output="mod"+str(i+1) |
|---|
| 891 | van="van"+str(i+1) |
|---|
| 892 | rdata="rdata"+str(i+1) |
|---|
| 893 | if (van_norm): |
|---|
| 894 | print "Using vanadium file",vanfile |
|---|
| 895 | LoadNexus(Filename=vanfile,OutputWorkspace=van,EntryNumber=i+1) |
|---|
| 896 | ExtractSingleSpectrum(InputWorkspace=focus,OutputWorkspace=rdata,WorkspaceIndex=i) |
|---|
| 897 | #ConvertUnits(van,van,"TOF") |
|---|
| 898 | Rebin(InputWorkspace=van,OutputWorkspace=van,Params=tofbinning) |
|---|
| 899 | ConvertUnits(InputWorkspace=rdata,OutputWorkspace=rdata,Target="TOF") |
|---|
| 900 | Rebin(InputWorkspace=rdata,OutputWorkspace=rdata,Params=tofbinning) |
|---|
| 901 | Divide(LHSWorkspace=rdata,RHSWorkspace=van,OutputWorkspace=output) |
|---|
| 902 | CropWorkspace(InputWorkspace=output,OutputWorkspace=output,XMin=0.1) |
|---|
| 903 | Scale(InputWorkspace=output,OutputWorkspace=output,Factor=10) |
|---|
| 904 | else: |
|---|
| 905 | print "Not Using vanadium file" |
|---|
| 906 | #LoadNexus(Filename=vanfile,OutputWorkspace=van,EntryNumber=i+1) |
|---|
| 907 | ExtractSingleSpectrum(InputWorkspace=focus,OutputWorkspace=rdata,WorkspaceIndex=i) |
|---|
| 908 | #ConvertUnits(van,van,"TOF") |
|---|
| 909 | #Rebin(van,van,tofbinning) |
|---|
| 910 | ConvertUnits(InputWorkspace=rdata,OutputWorkspace=rdata,Target="TOF") |
|---|
| 911 | Rebin(InputWorkspace=rdata,OutputWorkspace=output,Params=tofbinning) |
|---|
| 912 | #Divide(rdata,van,output) |
|---|
| 913 | CropWorkspace(InputWorkspace=output,OutputWorkspace=output,XMin=0.1) |
|---|
| 914 | if (debug!=True): |
|---|
| 915 | mtd.remove(focus) |
|---|
| 916 | |
|---|
| 917 | if (mode=="all"): |
|---|
| 918 | CloneWorkspace(InputWorkspace="mod1",OutputWorkspace="bank1") |
|---|
| 919 | for i in range(1,9): |
|---|
| 920 | toadd="mod"+str(i+1) |
|---|
| 921 | Plus(LHSWorkspace="bank1",RHSWorkspace=toadd,OutputWorkspace="bank1") |
|---|
| 922 | Scale(InputWorkspace="bank1",OutputWorkspace="bank1",Factor=0.111111111111111) |
|---|
| 923 | SaveGSS(InputWorkspace="bank1",Filename=gssfile,Append=False,Bank=1) |
|---|
| 924 | ConvertUnits(InputWorkspace="bank1",OutputWorkspace="bank1",Target="dSpacing") |
|---|
| 925 | SaveNexus(Filename=outfile,InputWorkspace="bank1",Append=False) |
|---|
| 926 | for i in range(0,5): |
|---|
| 927 | tosave="mod"+str(i+10) |
|---|
| 928 | SaveGSS(InputWorkspace=tosave,Filename=gssfile,Append=True,Bank=i+2) |
|---|
| 929 | ConvertUnits(InputWorkspace=tosave,OutputWorkspace=tosave,Target="dSpacing") |
|---|
| 930 | SaveNexus(Filename=outfile,InputWorkspace=tosave,Append=True) |
|---|
| 931 | |
|---|
| 932 | if (debug!=True): |
|---|
| 933 | for i in range(0,14): |
|---|
| 934 | output="mod"+str(i+1) |
|---|
| 935 | van="van"+str(i+1) |
|---|
| 936 | rdata="rdata"+str(i+1) |
|---|
| 937 | mtd.remove(rdata) |
|---|
| 938 | mtd.remove(van) |
|---|
| 939 | mtd.remove(output) |
|---|
| 940 | mtd.remove("bank1") |
|---|
| 941 | |
|---|
| 942 | elif (mode=="groups"): |
|---|
| 943 | CloneWorkspace(InputWorkspace="mod1",OutputWorkspace="group1") |
|---|
| 944 | CloneWorkspace(InputWorkspace="mod4",OutputWorkspace="group2") |
|---|
| 945 | CloneWorkspace(InputWorkspace="mod7",OutputWorkspace="group3") |
|---|
| 946 | for i in range(1,3): |
|---|
| 947 | toadd="mod"+str(i+1) |
|---|
| 948 | Plus(LHSWorkspace="group1",RHSWorkspace=toadd,OutputWorkspace="group1") |
|---|
| 949 | Scale(InputWorkspace="group1",OutputWorkspace="group1",Factor=0.333333333333) |
|---|
| 950 | for i in range(1,3): |
|---|
| 951 | toadd="mod"+str(i+4) |
|---|
| 952 | Plus(LHSWorkspace="group2",RHSWorkspace=toadd,OutputWorkspace="group2") |
|---|
| 953 | Scale(InputWorkspace="group2",OutputWorkspace="group2",Factor=0.333333333333) |
|---|
| 954 | for i in range(1,3): |
|---|
| 955 | toadd="mod"+str(i+7) |
|---|
| 956 | Plus(LHSWorkspace="group3",RHSWorkspace=toadd,OutputWorkspace="group3") |
|---|
| 957 | Scale(InputWorkspace="group3",OutputWorkspace="group3",Factor=0.333333333333) |
|---|
| 958 | Plus(LHSWorkspace="group2",RHSWorkspace="group3",OutputWorkspace="group23") |
|---|
| 959 | Scale(InputWorkspace="group23",OutputWorkspace="group23",Factor=0.5) |
|---|
| 960 | SaveGSS(InputWorkspace="group1",Filename=gssfile,Append=False,Bank=1) |
|---|
| 961 | ConvertUnits(InputWorkspace="group1",OutputWorkspace="group1",Target="dSpacing") |
|---|
| 962 | SaveNexus(Filename=outfile,InputWorkspace="group1",Append=False) |
|---|
| 963 | SaveGSS(InputWorkspace="group2",Filename=gssfile,Append=True,Bank=2) |
|---|
| 964 | ConvertUnits(InputWorkspace="group2",OutputWorkspace="group2",Target="dSpacing") |
|---|
| 965 | SaveNexus(Filename=outfile,InputWorkspace="group2",Append=True) |
|---|
| 966 | SaveGSS(InputWorkspace="group3",Filename=gssfile,Append=True,Bank=3) |
|---|
| 967 | ConvertUnits(InputWorkspace="group3",OutputWorkspace="group3",Target="dSpacing") |
|---|
| 968 | SaveNexus(Filename=outfile,InputWorkspace="group3",Append=True) |
|---|
| 969 | SaveGSS(InputWorkspace="group23",Filename=gssfile,Append=True,Bank=4) |
|---|
| 970 | ConvertUnits(InputWorkspace="group23",OutputWorkspace="group23",Target="dSpacing") |
|---|
| 971 | SaveNexus(Filename=outfile,InputWorkspace="group23",Append=True) |
|---|
| 972 | for i in range(0,3): |
|---|
| 973 | tosave="mod"+str(i+10) |
|---|
| 974 | SaveGSS(InputWorkspace=tosave,Filename=gssfile,Append=True,Bank=i+5) |
|---|
| 975 | ConvertUnits(InputWorkspace=tosave,OutputWorkspace=tosave,Target="dSpacing") |
|---|
| 976 | SaveNexus(Filename=outfile,InputWorkspace=tosave,Append=True) |
|---|
| 977 | if (debug!=True): |
|---|
| 978 | for i in range(0,14): |
|---|
| 979 | output="mod"+str(i+1) |
|---|
| 980 | van="van"+str(i+1) |
|---|
| 981 | rdata="rdata"+str(i+1) |
|---|
| 982 | mtd.remove(rdata) |
|---|
| 983 | mtd.remove(van) |
|---|
| 984 | mtd.remove(output) |
|---|
| 985 | mtd.remove("group1") |
|---|
| 986 | mtd.remove("group2") |
|---|
| 987 | mtd.remove("group3") |
|---|
| 988 | mtd.remove("group23") |
|---|
| 989 | |
|---|
| 990 | elif (mode=="trans"): |
|---|
| 991 | CloneWorkspace(InputWorkspace="mod1",OutputWorkspace="bank1") |
|---|
| 992 | for i in range(1,9): |
|---|
| 993 | toadd="mod"+str(i+1) |
|---|
| 994 | Plus(LHSWorkspace="bank1",RHSWorkspace=toadd,OutputWorkspace="bank1") |
|---|
| 995 | Scale(InputWorkspace="bank1",OutputWorkspace="bank1",Factor=0.111111111111111) |
|---|
| 996 | if (atten): |
|---|
| 997 | ConvertUnits(InputWorkspace="bank1",OutputWorkspace="bank1",Target="dSpacing") |
|---|
| 998 | CloneWorkspace(InputWorkspace="bank1",OutputWorkspace=outwork+"_noatten") |
|---|
| 999 | PEARL_atten("bank1","bank1") |
|---|
| 1000 | ConvertUnits(InputWorkspace="bank1",OutputWorkspace="bank1",Target="TOF") |
|---|
| 1001 | |
|---|
| 1002 | SaveGSS(InputWorkspace="bank1",Filename=gssfile,Append=False,Bank=1) |
|---|
| 1003 | SaveFocusedXYE(InputWorkspace="bank1",Filename=tof_xye_file,Append=False,IncludeHeader=False) |
|---|
| 1004 | ConvertUnits(InputWorkspace="bank1",OutputWorkspace="bank1",Target="dSpacing") |
|---|
| 1005 | SaveFocusedXYE(InputWorkspace="bank1",Filename=d_xye_file,Append=False,IncludeHeader=False) |
|---|
| 1006 | SaveNexus(Filename=outfile,InputWorkspace="bank1",Append=False) |
|---|
| 1007 | for i in range(0,9): |
|---|
| 1008 | tosave="mod"+str(i+1) |
|---|
| 1009 | #SaveGSS(tosave,Filename=gssfile,Append=True,Bank=i+2) |
|---|
| 1010 | ConvertUnits(InputWorkspace=tosave,OutputWorkspace=tosave,Target="dSpacing") |
|---|
| 1011 | SaveNexus(Filename=outfile,InputWorkspace=tosave,Append=True) |
|---|
| 1012 | |
|---|
| 1013 | if (debug!=True): |
|---|
| 1014 | for i in range(0,14): |
|---|
| 1015 | output="mod"+str(i+1) |
|---|
| 1016 | van="van"+str(i+1) |
|---|
| 1017 | rdata="rdata"+str(i+1) |
|---|
| 1018 | mtd.remove(rdata) |
|---|
| 1019 | mtd.remove(van) |
|---|
| 1020 | mtd.remove(output) |
|---|
| 1021 | mtd.remove("bank1") |
|---|
| 1022 | |
|---|
| 1023 | elif (mode=="mods"): |
|---|
| 1024 | for i in range(0,12): |
|---|
| 1025 | output="mod"+str(i+1) |
|---|
| 1026 | van="van"+str(i+1) |
|---|
| 1027 | rdata="rdata"+str(i+1) |
|---|
| 1028 | if (i==0): |
|---|
| 1029 | SaveGSS(InputWorkspace=output,Filename=gssfile,Append=False,Bank=i+1) |
|---|
| 1030 | ConvertUnits(InputWorkspace=output,OutputWorkspace=output,Target="dSpacing") |
|---|
| 1031 | SaveNexus(Filename=outfile,InputWorkspace=output,Append=False) |
|---|
| 1032 | else: |
|---|
| 1033 | SaveGSS(InputWorkspace=output,Filename=gssfile,Append=True,Bank=i+1) |
|---|
| 1034 | ConvertUnits(InputWorkspace=output,OutputWorkspace=output,Target="dSpacing") |
|---|
| 1035 | SaveNexus(Filename=outfile,InputWorkspace=output,Append=True) |
|---|
| 1036 | if (debug!=True): |
|---|
| 1037 | mtd.remove(rdata) |
|---|
| 1038 | mtd.remove(van) |
|---|
| 1039 | mtd.remove(output) |
|---|
| 1040 | |
|---|
| 1041 | else: |
|---|
| 1042 | print "Sorry I don't know that mode", mode |
|---|
| 1043 | return |
|---|
| 1044 | |
|---|
| 1045 | LoadNexus(Filename=outfile,OutputWorkspace=outwork) |
|---|
| 1046 | return outwork |
|---|
| 1047 | |
|---|
| 1048 | |
|---|
| 1049 | def PEARL_createvan(van,empty,ext="raw",fmode="all",ttmode="TT88",nvanfile="P:\Mantid\\Calibration\\van_spline_all_cycle_11_1.nxs",nspline=60,absorb=True,debug=False): |
|---|
| 1050 | global mode |
|---|
| 1051 | global tt_mode |
|---|
| 1052 | mode=fmode |
|---|
| 1053 | tt_mode=ttmode |
|---|
| 1054 | |
|---|
| 1055 | PEARL_getcycle(van) |
|---|
| 1056 | PEARL_getcalibfiles() |
|---|
| 1057 | wvan="wvan" |
|---|
| 1058 | wempty="wempty" |
|---|
| 1059 | print "Creating ", nvanfile |
|---|
| 1060 | PEARL_read(van,"raw",wvan) |
|---|
| 1061 | PEARL_read(empty,"raw",wempty) |
|---|
| 1062 | Minus(LHSWorkspace=wvan,RHSWorkspace=wempty,OutputWorkspace=wvan) |
|---|
| 1063 | print "read van and empty" |
|---|
| 1064 | if (debug!=True): |
|---|
| 1065 | mtd.remove(wempty) |
|---|
| 1066 | |
|---|
| 1067 | if(absorb==True): |
|---|
| 1068 | print "Correcting Vanadium for absorbtion" |
|---|
| 1069 | ConvertUnits(InputWorkspace=wvan,OutputWorkspace=wvan,Target="Wavelength") |
|---|
| 1070 | print "This will create", vabsorbfile |
|---|
| 1071 | # Comment out 3 lines below if absorbtion file exists and uncomment the load line |
|---|
| 1072 | #CreateSampleShape(wvan,'<sphere id="sphere_1"> <centre x="0" y="0" z= "0" /> <radius val="0.005" /> </sphere>') |
|---|
| 1073 | #AbsorptionCorrection(InputWorkspace=wvan,OutputWorkspace="T",AttenuationXSection="5.08", ScatteringXSection="5.1",SampleNumberDensity="0.072",NumberOfWavelengthPoints="25",ElementSize="0.05") |
|---|
| 1074 | #SaveNexus(Filename=vabsorbfile,InputWorkspace="T",Append=False) |
|---|
| 1075 | LoadNexus(Filename=vabsorbfile,OutputWorkspace="T") |
|---|
| 1076 | RebinToWorkspace(WorkspaceToRebin=wvan,WorkspaceToMatch="T",OutputWorkspace=wvan) |
|---|
| 1077 | Divide(LHSWorkspace=wvan,RHSWorkspace="T",OutputWorkspace=wvan) |
|---|
| 1078 | if (debug!=True): |
|---|
| 1079 | mtd.remove("T") |
|---|
| 1080 | |
|---|
| 1081 | ConvertUnits(InputWorkspace=wvan,OutputWorkspace=wvan,Target="TOF") |
|---|
| 1082 | trange="100,-0.0006,19990" |
|---|
| 1083 | print "Cropping TOF range to ",trange |
|---|
| 1084 | Rebin(InputWorkspace=wvan,OutputWorkspace=wvan,Params=trange) |
|---|
| 1085 | #tmin,tmax=PEARL_gettofrange() |
|---|
| 1086 | #print "Cropping TOF range to ",tmin,tmax |
|---|
| 1087 | #CropWorkspace(wvan,wvan,XMin=tmin,XMax=tmax) |
|---|
| 1088 | if (debug==True): |
|---|
| 1089 | print "About to focus" |
|---|
| 1090 | vanfoc="vanfoc_"+cycle |
|---|
| 1091 | AlignDetectors(InputWorkspace=wvan,OutputWorkspace=wvan,CalibrationFile=calfile) |
|---|
| 1092 | DiffractionFocussing(InputWorkspace=wvan,OutputWorkspace=vanfoc,GroupingFileName=groupfile) |
|---|
| 1093 | ConvertUnits(InputWorkspace=vanfoc,OutputWorkspace=vanfoc,Target="TOF") |
|---|
| 1094 | trange="150,-0.0006,19900" |
|---|
| 1095 | print "Cropping TOF range to ",trange |
|---|
| 1096 | Rebin(InputWorkspace=vanfoc,OutputWorkspace=vanfoc,Params=trange) |
|---|
| 1097 | ConvertUnits(InputWorkspace=vanfoc,OutputWorkspace=vanfoc,Target="dSpacing") |
|---|
| 1098 | |
|---|
| 1099 | if (debug!=True): |
|---|
| 1100 | mtd.remove(wvan) |
|---|
| 1101 | |
|---|
| 1102 | |
|---|
| 1103 | |
|---|
| 1104 | |
|---|
| 1105 | |
|---|
| 1106 | if (instver=="new2"): |
|---|
| 1107 | ConvertUnits(InputWorkspace=vanfoc,OutputWorkspace="vanmask",Target="dSpacing") |
|---|
| 1108 | if (debug!=True): |
|---|
| 1109 | mtd.remove(vanfoc) |
|---|
| 1110 | |
|---|
| 1111 | #remove bragg peaks before spline |
|---|
| 1112 | |
|---|
| 1113 | print "About to strip Work=0" |
|---|
| 1114 | StripPeaks(InputWorkspace="vanmask",OutputWorkspace="vanstrip",FWHM=15, Tolerance=8, WorkspaceIndex=0) |
|---|
| 1115 | print "About to strip Work=1" |
|---|
| 1116 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=15, Tolerance=8, WorkspaceIndex=1) |
|---|
| 1117 | print "About to strip Work=2" |
|---|
| 1118 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=15, Tolerance=8, WorkspaceIndex=2) |
|---|
| 1119 | print "About to strip Work=3" |
|---|
| 1120 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=15, Tolerance=8, WorkspaceIndex=3) |
|---|
| 1121 | print "About to strip Work=4" |
|---|
| 1122 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=15, Tolerance=8, WorkspaceIndex=4) |
|---|
| 1123 | print "About to strip Work=5" |
|---|
| 1124 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=15, Tolerance=8, WorkspaceIndex=5) |
|---|
| 1125 | print "About to strip Work=6" |
|---|
| 1126 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=15, Tolerance=8, WorkspaceIndex=6) |
|---|
| 1127 | print "About to strip Work=7" |
|---|
| 1128 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=15, Tolerance=8, WorkspaceIndex=7) |
|---|
| 1129 | print "About to strip Work=8" |
|---|
| 1130 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=15, Tolerance=8, WorkspaceIndex=8) |
|---|
| 1131 | print "About to strip Work=9" |
|---|
| 1132 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=15, Tolerance=8, WorkspaceIndex=9) |
|---|
| 1133 | print "About to strip Work=10" |
|---|
| 1134 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=15, Tolerance=8, WorkspaceIndex=10) |
|---|
| 1135 | print "About to strip Work=11" |
|---|
| 1136 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=15, Tolerance=8, WorkspaceIndex=11) |
|---|
| 1137 | print "About to strip Work=12" |
|---|
| 1138 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=100, Tolerance=10, WorkspaceIndex=12) |
|---|
| 1139 | print "About to strip Work=13" |
|---|
| 1140 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=60, Tolerance=10, WorkspaceIndex=13) |
|---|
| 1141 | |
|---|
| 1142 | #run twice on low angle as peaks are very broad |
|---|
| 1143 | print "About to strip Work=12 (again)" |
|---|
| 1144 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=100, Tolerance=10, WorkspaceIndex=12) |
|---|
| 1145 | print "About to strip Work=13 (again)" |
|---|
| 1146 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=60, Tolerance=10, WorkspaceIndex=13) |
|---|
| 1147 | |
|---|
| 1148 | print "Finished striping-out peaks..." |
|---|
| 1149 | |
|---|
| 1150 | if (debug!=True): |
|---|
| 1151 | mtd.remove("vanmask") |
|---|
| 1152 | |
|---|
| 1153 | if (debug!=True): |
|---|
| 1154 | print "Not in debug mode so will delete all temporary workspaces" |
|---|
| 1155 | |
|---|
| 1156 | ConvertUnits(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",Target="TOF") |
|---|
| 1157 | |
|---|
| 1158 | print "Starting splines..." |
|---|
| 1159 | |
|---|
| 1160 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline1",WorkspaceIndex=0,NCoeff=nspline) |
|---|
| 1161 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline2",WorkspaceIndex=1,NCoeff=nspline) |
|---|
| 1162 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline3",WorkspaceIndex=2,NCoeff=nspline) |
|---|
| 1163 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline4",WorkspaceIndex=3,NCoeff=nspline) |
|---|
| 1164 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline5",WorkspaceIndex=4,NCoeff=nspline) |
|---|
| 1165 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline6",WorkspaceIndex=5,NCoeff=nspline) |
|---|
| 1166 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline7",WorkspaceIndex=6,NCoeff=nspline) |
|---|
| 1167 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline8",WorkspaceIndex=7,NCoeff=nspline) |
|---|
| 1168 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline9",WorkspaceIndex=8,NCoeff=nspline) |
|---|
| 1169 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline10",WorkspaceIndex=9,NCoeff=nspline) |
|---|
| 1170 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline11",WorkspaceIndex=10,NCoeff=nspline) |
|---|
| 1171 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline12",WorkspaceIndex=11,NCoeff=nspline) |
|---|
| 1172 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline13",WorkspaceIndex=12,NCoeff=nspline) |
|---|
| 1173 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline14",WorkspaceIndex=13,NCoeff=nspline) |
|---|
| 1174 | |
|---|
| 1175 | #ConvertUnits("spline1","spline1","TOF") |
|---|
| 1176 | #ConvertUnits("spline2","spline2","TOF") |
|---|
| 1177 | #ConvertUnits("spline3","spline3","TOF") |
|---|
| 1178 | #ConvertUnits("spline4","spline4","TOF") |
|---|
| 1179 | #ConvertUnits("spline5","spline5","TOF") |
|---|
| 1180 | #ConvertUnits("spline6","spline6","TOF") |
|---|
| 1181 | #ConvertUnits("spline7","spline7","TOF") |
|---|
| 1182 | #ConvertUnits("spline8","spline8","TOF") |
|---|
| 1183 | #ConvertUnits("spline9","spline9","TOF") |
|---|
| 1184 | #ConvertUnits("spline10","spline10","TOF") |
|---|
| 1185 | #ConvertUnits("spline11","spline11","TOF") |
|---|
| 1186 | #ConvertUnits("spline12","spline12","TOF") |
|---|
| 1187 | SaveNexus(Filename=nvanfile,InputWorkspace="spline1",Append=False) |
|---|
| 1188 | SaveNexus(Filename=nvanfile,InputWorkspace="spline2",Append=True) |
|---|
| 1189 | SaveNexus(Filename=nvanfile,InputWorkspace="spline3",Append=True) |
|---|
| 1190 | SaveNexus(Filename=nvanfile,InputWorkspace="spline4",Append=True) |
|---|
| 1191 | SaveNexus(Filename=nvanfile,InputWorkspace="spline5",Append=True) |
|---|
| 1192 | SaveNexus(Filename=nvanfile,InputWorkspace="spline6",Append=True) |
|---|
| 1193 | SaveNexus(Filename=nvanfile,InputWorkspace="spline7",Append=True) |
|---|
| 1194 | SaveNexus(Filename=nvanfile,InputWorkspace="spline8",Append=True) |
|---|
| 1195 | SaveNexus(Filename=nvanfile,InputWorkspace="spline9",Append=True) |
|---|
| 1196 | SaveNexus(Filename=nvanfile,InputWorkspace="spline10",Append=True) |
|---|
| 1197 | SaveNexus(Filename=nvanfile,InputWorkspace="spline11",Append=True) |
|---|
| 1198 | SaveNexus(Filename=nvanfile,InputWorkspace="spline12",Append=True) |
|---|
| 1199 | SaveNexus(Filename=nvanfile,InputWorkspace="spline13",Append=True) |
|---|
| 1200 | SaveNexus(Filename=nvanfile,InputWorkspace="spline14",Append=True) |
|---|
| 1201 | if (debug!=True): |
|---|
| 1202 | mtd.remove("vanstrip") |
|---|
| 1203 | mtd.remove("spline1") |
|---|
| 1204 | mtd.remove("spline2") |
|---|
| 1205 | mtd.remove("spline3") |
|---|
| 1206 | mtd.remove("spline4") |
|---|
| 1207 | mtd.remove("spline5") |
|---|
| 1208 | mtd.remove("spline6") |
|---|
| 1209 | mtd.remove("spline7") |
|---|
| 1210 | mtd.remove("spline8") |
|---|
| 1211 | mtd.remove("spline9") |
|---|
| 1212 | mtd.remove("spline10") |
|---|
| 1213 | mtd.remove("spline11") |
|---|
| 1214 | mtd.remove("spline12") |
|---|
| 1215 | mtd.remove("spline13") |
|---|
| 1216 | mtd.remove("spline14") |
|---|
| 1217 | elif (instver=="new"): |
|---|
| 1218 | ConvertUnits(InputWorkspace=vanfoc,OutputWorkspace="vanmask",Target="dSpacing") |
|---|
| 1219 | if (debug!=True): |
|---|
| 1220 | mtd.remove(vanfoc) |
|---|
| 1221 | |
|---|
| 1222 | #remove bragg peaks before spline |
|---|
| 1223 | StripPeaks(InputWorkspace="vanmask",OutputWorkspace="vanstrip",FWHM=15, Tolerance=8, WorkspaceIndex=0) |
|---|
| 1224 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=15, Tolerance=8, WorkspaceIndex=1) |
|---|
| 1225 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=15, Tolerance=8, WorkspaceIndex=2) |
|---|
| 1226 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=15, Tolerance=8, WorkspaceIndex=3) |
|---|
| 1227 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=15, Tolerance=8, WorkspaceIndex=4) |
|---|
| 1228 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=15, Tolerance=8, WorkspaceIndex=5) |
|---|
| 1229 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=15, Tolerance=8, WorkspaceIndex=6) |
|---|
| 1230 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=15, Tolerance=8, WorkspaceIndex=7) |
|---|
| 1231 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=15, Tolerance=8, WorkspaceIndex=8) |
|---|
| 1232 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=15, Tolerance=8, WorkspaceIndex=9) |
|---|
| 1233 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=15, Tolerance=8, WorkspaceIndex=10) |
|---|
| 1234 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=15, Tolerance=8, WorkspaceIndex=11) |
|---|
| 1235 | |
|---|
| 1236 | if (debug!=True): |
|---|
| 1237 | mtd.remove("vanmask") |
|---|
| 1238 | |
|---|
| 1239 | if (debug!=True): |
|---|
| 1240 | print "Not in debug mode so will delete all temporary workspaces" |
|---|
| 1241 | |
|---|
| 1242 | ConvertUnits(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",Target="TOF") |
|---|
| 1243 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline1",WorkspaceIndex=0,NCoeff=nspline) |
|---|
| 1244 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline2",WorkspaceIndex=1,NCoeff=nspline) |
|---|
| 1245 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline3",WorkspaceIndex=2,NCoeff=nspline) |
|---|
| 1246 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline4",WorkspaceIndex=3,NCoeff=nspline) |
|---|
| 1247 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline5",WorkspaceIndex=4,NCoeff=nspline) |
|---|
| 1248 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline6",WorkspaceIndex=5,NCoeff=nspline) |
|---|
| 1249 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline7",WorkspaceIndex=6,NCoeff=nspline) |
|---|
| 1250 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline8",WorkspaceIndex=7,NCoeff=nspline) |
|---|
| 1251 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline9",WorkspaceIndex=8,NCoeff=nspline) |
|---|
| 1252 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline10",WorkspaceIndex=9,NCoeff=nspline) |
|---|
| 1253 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline11",WorkspaceIndex=10,NCoeff=nspline) |
|---|
| 1254 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline12",WorkspaceIndex=11,NCoeff=nspline) |
|---|
| 1255 | #ConvertUnits("spline1","spline1","TOF") |
|---|
| 1256 | #ConvertUnits("spline2","spline2","TOF") |
|---|
| 1257 | #ConvertUnits("spline3","spline3","TOF") |
|---|
| 1258 | #ConvertUnits("spline4","spline4","TOF") |
|---|
| 1259 | #ConvertUnits("spline5","spline5","TOF") |
|---|
| 1260 | #ConvertUnits("spline6","spline6","TOF") |
|---|
| 1261 | #ConvertUnits("spline7","spline7","TOF") |
|---|
| 1262 | #ConvertUnits("spline8","spline8","TOF") |
|---|
| 1263 | #ConvertUnits("spline9","spline9","TOF") |
|---|
| 1264 | #ConvertUnits("spline10","spline10","TOF") |
|---|
| 1265 | #ConvertUnits("spline11","spline11","TOF") |
|---|
| 1266 | #ConvertUnits("spline12","spline12","TOF") |
|---|
| 1267 | SaveNexus(Filename=nvanfile,InputWorkspace="spline1",Append=False) |
|---|
| 1268 | SaveNexus(Filename=nvanfile,InputWorkspace="spline2",Append=True) |
|---|
| 1269 | SaveNexus(Filename=nvanfile,InputWorkspace="spline3",Append=True) |
|---|
| 1270 | SaveNexus(Filename=nvanfile,InputWorkspace="spline4",Append=True) |
|---|
| 1271 | SaveNexus(Filename=nvanfile,InputWorkspace="spline5",Append=True) |
|---|
| 1272 | SaveNexus(Filename=nvanfile,InputWorkspace="spline6",Append=True) |
|---|
| 1273 | SaveNexus(Filename=nvanfile,InputWorkspace="spline7",Append=True) |
|---|
| 1274 | SaveNexus(Filename=nvanfile,InputWorkspace="spline8",Append=True) |
|---|
| 1275 | SaveNexus(Filename=nvanfile,InputWorkspace="spline9",Append=True) |
|---|
| 1276 | SaveNexus(Filename=nvanfile,InputWorkspace="spline10",Append=True) |
|---|
| 1277 | SaveNexus(Filename=nvanfile,InputWorkspace="spline11",Append=True) |
|---|
| 1278 | SaveNexus(Filename=nvanfile,InputWorkspace="spline12",Append=True) |
|---|
| 1279 | if (debug!=True): |
|---|
| 1280 | mtd.remove("vanstrip") |
|---|
| 1281 | mtd.remove("spline1") |
|---|
| 1282 | mtd.remove("spline2") |
|---|
| 1283 | mtd.remove("spline3") |
|---|
| 1284 | mtd.remove("spline4") |
|---|
| 1285 | mtd.remove("spline5") |
|---|
| 1286 | mtd.remove("spline6") |
|---|
| 1287 | mtd.remove("spline7") |
|---|
| 1288 | mtd.remove("spline8") |
|---|
| 1289 | mtd.remove("spline9") |
|---|
| 1290 | mtd.remove("spline10") |
|---|
| 1291 | mtd.remove("spline11") |
|---|
| 1292 | mtd.remove("spline12") |
|---|
| 1293 | elif (instver=="old"): |
|---|
| 1294 | ConvertUnits(InputWorkspace=vanfoc,OutputWorkspace="vanmask",Target="dSpacing") |
|---|
| 1295 | if (debug!=True): |
|---|
| 1296 | mtd.remove(vanfoc) |
|---|
| 1297 | |
|---|
| 1298 | #remove bragg peaks before spline |
|---|
| 1299 | StripPeaks(InputWorkspace="vanmask",OutputWorkspace="vanstrip",FWHM=15, Tolerance=6, WorkspaceIndex=0) |
|---|
| 1300 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=15, Tolerance=6, WorkspaceIndex=2) |
|---|
| 1301 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=15, Tolerance=6, WorkspaceIndex=3) |
|---|
| 1302 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=40, Tolerance=12, WorkspaceIndex=1) |
|---|
| 1303 | StripPeaks(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",FWHM=60, Tolerance=12, WorkspaceIndex=1) |
|---|
| 1304 | |
|---|
| 1305 | |
|---|
| 1306 | |
|---|
| 1307 | if (debug!=True): |
|---|
| 1308 | mtd.remove("vanmask") |
|---|
| 1309 | |
|---|
| 1310 | #Mask low d region that is zero before spline |
|---|
| 1311 | for reg in range(0,4): |
|---|
| 1312 | if (reg==1): |
|---|
| 1313 | MaskBins(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",XMin=0,XMax=0.14, SpectraList=reg) |
|---|
| 1314 | else: |
|---|
| 1315 | MaskBins(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",XMin=0,XMax=0.06, SpectraList=reg) |
|---|
| 1316 | |
|---|
| 1317 | if (debug!=True): |
|---|
| 1318 | print "Not in debug mode so will delete all temporary workspaces" |
|---|
| 1319 | |
|---|
| 1320 | ConvertUnits(InputWorkspace="vanstrip",OutputWorkspace="vanstrip",Target="TOF") |
|---|
| 1321 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline1",WorkspaceIndex=0,NCoeff=100) |
|---|
| 1322 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline2",WorkspaceIndex=1,NCoeff=80) |
|---|
| 1323 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline3",WorkspaceIndex=2,NCoeff=100) |
|---|
| 1324 | SplineBackground(InputWorkspace="vanstrip",OutputWorkspace="spline4",WorkspaceIndex=3,NCoeff=100) |
|---|
| 1325 | #ConvertUnits("spline1","spline1","TOF") |
|---|
| 1326 | #ConvertUnits("spline2","spline2","TOF") |
|---|
| 1327 | #ConvertUnits("spline3","spline3","TOF") |
|---|
| 1328 | #ConvertUnits("spline4","spline4","TOF") |
|---|
| 1329 | SaveNexus(Filename=nvanfile,InputWorkspace="spline1",Append=False) |
|---|
| 1330 | SaveNexus(Filename=nvanfile,InputWorkspace="spline2",Append=True) |
|---|
| 1331 | SaveNexus(Filename=nvanfile,InputWorkspace="spline3",Append=True) |
|---|
| 1332 | SaveNexus(Filename=nvanfile,InputWorkspace="spline4",Append=True) |
|---|
| 1333 | if (debug!=True): |
|---|
| 1334 | mtd.remove("vanstrip") |
|---|
| 1335 | mtd.remove("spline1") |
|---|
| 1336 | mtd.remove("spline2") |
|---|
| 1337 | mtd.remove("spline3") |
|---|
| 1338 | mtd.remove("spline4") |
|---|
| 1339 | else: |
|---|
| 1340 | print "Sorry I don't know that mode" |
|---|
| 1341 | return |
|---|
| 1342 | |
|---|
| 1343 | |
|---|
| 1344 | LoadNexus(Filename=nvanfile,OutputWorkspace="Van_data") |
|---|
| 1345 | |
|---|
| 1346 | return |
|---|
| 1347 | |
|---|
| 1348 | def PEARL_createcal(calruns, noffsetfile="C:\PEARL\\pearl_offset_11_2.cal"): |
|---|
| 1349 | |
|---|
| 1350 | PEARL_getcycle(calruns) |
|---|
| 1351 | |
|---|
| 1352 | print "Instrument version is ",instver |
|---|
| 1353 | |
|---|
| 1354 | if (instver=="new2"): |
|---|
| 1355 | wcal="cal_raw" |
|---|
| 1356 | PEARL_read(calruns,"raw",wcal) |
|---|
| 1357 | Rebin(InputWorkspace=wcal,OutputWorkspace=wcal,Params="100,-0.0006,19950") |
|---|
| 1358 | ConvertUnits(InputWorkspace=wcal,OutputWorkspace="cal_inD",Target="dSpacing") |
|---|
| 1359 | Rebin(InputWorkspace="cal_inD",OutputWorkspace="cal_Drebin",Params="1.8,0.002,2.1") |
|---|
| 1360 | CrossCorrelate(InputWorkspace="cal_Drebin",OutputWorkspace="crosscor",ReferenceSpectra=20,WorkspaceIndexMin=9,WorkspaceIndexMax=1063,XMin=1.8,XMax=2.1) |
|---|
| 1361 | #Ceo Cell refeined to 5.4102(3) so 220 is 1.912795 |
|---|
| 1362 | GetDetectorOffsets(InputWorkspace="crosscor",OutputWorkspace="OutputOffsets",Step=0.002,DReference=1.912795,XMin=-200,XMax=200,GroupingFileName=noffsetfile) |
|---|
| 1363 | AlignDetectors(InputWorkspace=wcal,OutputWorkspace="cal_aligned",CalibrationFile=noffsetfile) |
|---|
| 1364 | DiffractionFocussing(InputWorkspace="cal_aligned",OutputWorkspace="cal_grouped",GroupingFileName=groupfile) |
|---|
| 1365 | elif (instver=="new"): |
|---|
| 1366 | wcal="cal_raw" |
|---|
| 1367 | PEARL_read(calruns,"raw",wcal) |
|---|
| 1368 | Rebin(InputWorkspace=wcal,OutputWorkspace=wcal,Params="100,-0.0006,19950") |
|---|
| 1369 | ConvertUnits(InputWorkspace=wcal,OutputWorkspace="cal_inD",Target="dSpacing") |
|---|
| 1370 | Rebin(InputWorkspace="cal_inD",OutputWorkspace="cal_Drebin",Params="1.8,0.002,2.1") |
|---|
| 1371 | CrossCorrelate(InputWorkspace="cal_Drebin",OutputWorkspace="crosscor",ReferenceSpectra=20,WorkspaceIndexMin=9,WorkspaceIndexMax=943,XMin=1.8,XMax=2.1) |
|---|
| 1372 | #Ceo Cell refeined to 5.4102(3) so 220 is 1.912795 |
|---|
| 1373 | GetDetectorOffsets(InputWorkspace="crosscor",OutputWorkspace="OutputOffsets",Step=0.002,DReference=1.912795,XMin=-200,XMax=200,GroupingFileName=noffsetfile) |
|---|
| 1374 | AlignDetectors(InputWorkspace=wcal,OutputWorkspace="cal_aligned",CalibrationFile=noffsetfile) |
|---|
| 1375 | DiffractionFocussing(InputWorkspace="cal_aligned",OutputWorkspace="cal_grouped",GroupingFileName=groupfile) |
|---|
| 1376 | else: |
|---|
| 1377 | wcal="cal_raw" |
|---|
| 1378 | PEARL_read(calruns,"raw",wcal) |
|---|
| 1379 | ConvertUnits(InputWorkspace=wcal,OutputWorkspace="cal_inD",Target="dSpacing") |
|---|
| 1380 | Rebin(InputWorkspace="cal_inD",OutputWorkspace="cal_Drebin",Params="1.8,0.002,2.1") |
|---|
| 1381 | CrossCorrelate(InputWorkspace="cal_Drebin",OutputWorkspace="crosscor",ReferenceSpectra=500,WorkspaceIndexMin=1,WorkspaceIndexMax=1440,XMin=1.8,XMax=2.1) |
|---|
| 1382 | #Ceo Cell refeined to 5.4102(3) so 220 is 1.912795 |
|---|
| 1383 | GetDetectorOffsets(InputWorkspace="crosscor",OutputWorkspace="OutputOffsets",Step=0.002,DReference=1.912795,XMin=-200,XMax=200,GroupingFileName=noffsetfile) |
|---|
| 1384 | AlignDetectors(InputWorkspace=wcal,OutputWorkspace="cal_aligned",CalibrationFile=noffsetfile) |
|---|
| 1385 | DiffractionFocussing(InputWorkspace="cal_aligned",OutputWorkspace="cal_grouped",GroupingFileName=groupfile) |
|---|
| 1386 | |
|---|
| 1387 | return |
|---|
| 1388 | |
|---|
| 1389 | def PEARL_createcal_Si(calruns, noffsetfile="C:\PEARL\\pearl_offset_11_2.cal"): |
|---|
| 1390 | |
|---|
| 1391 | PEARL_getcycle(calruns) |
|---|
| 1392 | |
|---|
| 1393 | if (instver=="new2"): |
|---|
| 1394 | wcal="cal_raw" |
|---|
| 1395 | PEARL_read(calruns,"raw",wcal) |
|---|
| 1396 | Rebin(InputWorkspace=wcal,OutputWorkspace=wcal,Params="100,-0.0006,19950") |
|---|
| 1397 | ConvertUnits(InputWorkspace=wcal,OutputWorkspace="cal_inD",Target="dSpacing") |
|---|
| 1398 | Rebin(InputWorkspace="cal_inD",OutputWorkspace="cal_Drebin",Params="1.71,0.002,2.1") |
|---|
| 1399 | CrossCorrelate(InputWorkspace="cal_Drebin",OutputWorkspace="crosscor",ReferenceSpectra=20,WorkspaceIndexMin=9,WorkspaceIndexMax=1063,XMin=1.71,XMax=2.1) |
|---|
| 1400 | GetDetectorOffsets(InputWorkspace="crosscor",OutputWorkspace="OutputOffsets",Step=0.002,DReference=1.920127251,XMin=-200,XMax=200,GroupingFileName=noffsetfile) |
|---|
| 1401 | AlignDetectors(InputWorkspace=wcal,OutputWorkspace="cal_aligned",CalibrationFile=noffsetfile) |
|---|
| 1402 | DiffractionFocussing(InputWorkspace="cal_aligned",OutputWorkspace="cal_grouped",GroupingFileName=groupfile) |
|---|
| 1403 | elif (instver=="new"): |
|---|
| 1404 | wcal="cal_raw" |
|---|
| 1405 | PEARL_read(calruns,"raw",wcal) |
|---|
| 1406 | Rebin(InputWorkspace=wcal,OutputWorkspace=wcal,Params="100,-0.0006,19950") |
|---|
| 1407 | ConvertUnits(InputWorkspace=wcal,OutputWorkspace="cal_inD",Target="dSpacing") |
|---|
| 1408 | Rebin(InputWorkspace="cal_inD",OutputWorkspace="cal_Drebin",Params="1.85,0.002,2.05") |
|---|
| 1409 | CrossCorrelate(InputWorkspace="cal_Drebin",OutputWorkspace="crosscor",ReferenceSpectra=20,WorkspaceIndexMin=9,WorkspaceIndexMax=943,XMin=1.85,XMax=2.05) |
|---|
| 1410 | GetDetectorOffsets(InputWorkspace="crosscor",OutputWorkspace="OutputOffsets",Step=0.002,DReference=1.920127251,XMin=-200,XMax=200,GroupingFileName=noffsetfile) |
|---|
| 1411 | AlignDetectors(InputWorkspace=wcal,OutputWorkspace="cal_aligned",CalibrationFile=noffsetfile) |
|---|
| 1412 | DiffractionFocussing(InputWorkspace="cal_aligned",OutputWorkspace="cal_grouped",GroupingFileName=groupfile) |
|---|
| 1413 | else: |
|---|
| 1414 | wcal="cal_raw" |
|---|
| 1415 | PEARL_read(calruns,"raw",wcal) |
|---|
| 1416 | ConvertUnits(InputWorkspace=wcal,OutputWorkspace="cal_inD",Target="dSpacing") |
|---|
| 1417 | Rebin(InputWorkspace="cal_inD",OutputWorkspace="cal_Drebin",Params="3,0.002,3.2") |
|---|
| 1418 | CrossCorrelate(InputWorkspace="cal_Drebin",OutputWorkspace="crosscor",ReferenceSpectra=500,WorkspaceIndexMin=1,WorkspaceIndexMax=1440,XMin=3,XMax=3.2) |
|---|
| 1419 | GetDetectorOffsets(InputWorkspace="crosscor",OutputWorkspace="OutputOffsets",Step=0.002,DReference=1.920127251,XMin=-200,XMax=200,GroupingFileName=noffsetfile) |
|---|
| 1420 | AlignDetectors(InputWorkspace=wcal,OutputWorkspace="cal_aligned",CalibrationFile=noffsetfile) |
|---|
| 1421 | DiffractionFocussing(InputWorkspace="cal_aligned",OutputWorkspace="cal_grouped",GroupingFileName=groupfile) |
|---|
| 1422 | |
|---|
| 1423 | return |
|---|
| 1424 | |
|---|
| 1425 | def PEARL_creategroup(calruns, ngroupfile="C:\PEARL\\test_cal_group_11_1.cal", ngroup="bank1,bank2,bank3,bank4"): |
|---|
| 1426 | |
|---|
| 1427 | wcal="cal_raw" |
|---|
| 1428 | PEARL_read(calruns,"raw",wcal) |
|---|
| 1429 | ConvertUnits(InputWorkspace=wcal,OutputWorkspace="cal_inD",Target="dSpacing") |
|---|
| 1430 | CreateCalFileByNames(InstrumentWorkspace=wcal,GroupingFileName=ngroupfile,GroupNames=ngroup) |
|---|
| 1431 | return |
|---|
| 1432 | |
|---|
| 1433 | |
|---|
| 1434 | def PEARL_sumspec(number,ext,mintof=500,maxtof=1000,minspec=0,maxspec=943): |
|---|
| 1435 | |
|---|
| 1436 | PEARL_getcycle(number) |
|---|
| 1437 | if (instver=="old"): |
|---|
| 1438 | maxspec=2720 |
|---|
| 1439 | elif (instver=="new"): |
|---|
| 1440 | maxspec=943 |
|---|
| 1441 | else: |
|---|
| 1442 | maxspec=1063 |
|---|
| 1443 | |
|---|
| 1444 | PearlLoad(number,ext,"work") |
|---|
| 1445 | NormaliseByCurrent(InputWorkspace="work",OutputWorkspace="work") |
|---|
| 1446 | Integration(InputWorkspace="work",OutputWorkspace="integral",RangeLower=mintof,RangeUpper=maxtof,StartWorkspaceIndex=minspec,EndWorkspaceIndex=maxspec) |
|---|
| 1447 | mtd.remove("work") |
|---|
| 1448 | #sumplot=plotBin("integral",0) |
|---|
| 1449 | return |
|---|
| 1450 | |
|---|
| 1451 | def PEARL_sumspec_lam(number,ext,minlam=0.1,maxlam=4,minspec=8,maxspec=943): |
|---|
| 1452 | |
|---|
| 1453 | PEARL_getcycle(number) |
|---|
| 1454 | if (instver=="old"): |
|---|
| 1455 | maxspec=2720 |
|---|
| 1456 | elif (instver=="new"): |
|---|
| 1457 | maxspec=943 |
|---|
| 1458 | else: |
|---|
| 1459 | maxspec=1063 |
|---|
| 1460 | |
|---|
| 1461 | PearlLoad(number,ext,"work") |
|---|
| 1462 | NormaliseByCurrent(InputWorkspace="work",OutputWorkspace="work") |
|---|
| 1463 | AlignDetectors(InputWorkspace="work",OutputWorkspace="work",CalibrationFile=calfile) |
|---|
| 1464 | ConvertUnits(InputWorkspace="worl",OutputWorkspace="work",Target="Wavelength") |
|---|
| 1465 | Integration(InputWorkspace="work",OutputWorkspace="integral",RangeLower=minlam,RangeUpper=maxlam,StartWorkspaceIndex=minspec,EndWorkspaceIndex=maxspec) |
|---|
| 1466 | mtd.remove("work") |
|---|
| 1467 | #sumplot=plotBin("integral",0) |
|---|
| 1468 | return |
|---|
| 1469 | |
|---|
| 1470 | def PEARL_atten(work,outwork,debug=False): |
|---|
| 1471 | |
|---|
| 1472 | #attenfile="P:\Mantid\\Attentuation\\PRL985_WC_HOYBIDE_NK_10MM_FF.OUT" |
|---|
| 1473 | print "Correct for attenuation using", attenfile |
|---|
| 1474 | wc_atten=PearlMCAbsorption(attenfile) |
|---|
| 1475 | ConvertToHistogram(InputWorkspace="wc_atten",OutputWorkspace="wc_atten") |
|---|
| 1476 | RebinToWorkspace(WorkspaceToRebin="wc_atten",WorkspaceToMatch=work,OutputWorkspace="wc_atten") |
|---|
| 1477 | Divide(LHSWorkspace=work,RHSWorkspace="wc_atten",OutputWorkspace=outwork) |
|---|
| 1478 | if (debug!=True): |
|---|
| 1479 | mtd.remove("wc_atten") |
|---|
| 1480 | return |
|---|
| 1481 | |
|---|
| 1482 | def PEARL_add(a_name,a_spectra,a_outname,atten=True): |
|---|
| 1483 | |
|---|
| 1484 | w_add_out=a_outname |
|---|
| 1485 | gssfile=userdataprocessed+a_outname+".gss" |
|---|
| 1486 | nxsfile=userdataprocessed+a_outname+".nxs" |
|---|
| 1487 | |
|---|
| 1488 | loop=0 |
|---|
| 1489 | for i in a_spectra[:]: |
|---|
| 1490 | loop=loop+1 |
|---|
| 1491 | if loop ==1: |
|---|
| 1492 | w_add1="PRL"+a_name+"_"+str(i) |
|---|
| 1493 | elif loop ==2: |
|---|
| 1494 | w_add2="PRL"+a_name+"_"+str(i) |
|---|
| 1495 | Plus(LHSWorkspace=w_add1,RHSWorkspace=w_add2,OutputWorkspace=w_add_out) |
|---|
| 1496 | else: |
|---|
| 1497 | w_add2="PRL"+a_name+"_"+str(i) |
|---|
| 1498 | Plus(LHSWorkspace=w_add_out,RHSWorkspace=w_add2,OutputWorkspace=w_add_out) |
|---|
| 1499 | if (atten): |
|---|
| 1500 | PEARL_atten(w_add_out,w_add_out) |
|---|
| 1501 | |
|---|
| 1502 | SaveNexus(Filename=nxsfile,InputWorkspace=w_add_out,Append=False) |
|---|
| 1503 | ConvertUnits(InputWorkspace=w_add_out,OutputWorkspace=w_add_out,Target="TOF") |
|---|
| 1504 | SaveGSS(InputWorkspace=w_add_out,Filename=gssfile,Append=False,Bank=i+1) |
|---|
| 1505 | ConvertUnits(InputWorkspace=w_add_out,OutputWorkspace=w_add_out,Target="dSpacing") |
|---|
| 1506 | |
|---|
| 1507 | return |
|---|
