POLDI specific analysis of residuals

[Michael Wedel]

After fitting a model to POLDI data (2D) there are usually some residuals. These are evaluated using a procedure which is based on the correlation analysis performed on POLDI raw data. This method reveals for example additional reflections that were not used in the fitting model.

Since it's vital for the POLDI data analysis, I have to add an algorithm that performs the analysis of residuals.

[Michael Wedel]

Refs #10432. Cleaning up PoldiAutoCorrelationCore, adding norm counts

Changeset: cd05ffc8d6883d39bb20e5e3d0c15570a772a096

[Michael Wedel]

Refs #10432. Added algorithm

Changeset: 9877170eec8f3a16e0f00956616aafa22d609f71

[Michael Wedel]

Refs #10432. Adding latest parameters for comparison.

Current software works with those parameters, so for comparison they are required.

Changeset: 39ff6ac19b5821f8dd7a200f9495a3d31977a980

[Michael Wedel]

Refs #10432. First steps of algorithm.

Changeset: 3c9556f657ad003c62b97416fb62f5a5e0c95c93

[Michael Wedel]

Refs #10432. Small changes to PoldiCalculateSpectrum2D

Changeset: 8112591b9bd87638513d306d967f62384de60709

[Michael Wedel]

Refs #10432. Removing magic number from CostFuncLeastSquares

Changeset: e41045891877341621472360650ff412e8103f52

[Michael Wedel]

Refs #10432. Some more refactoring in PoldiAutoCorrelationCore

This is needed as preparation for implementing the residual calculation, because some of the steps are actually different.

Changeset: c7e2723692c3fe02d464ad215770b83fdd696419

[Michael Wedel]

Refs #10432. Added PoldiResidualCorrelatonCore.

Algorithm is working correctly.

Changeset: 9a714cdd026c14db87afdcf7645345256cb29c44

[Michael Wedel]

Refs #10432. Refactored PoldiResidualCorrelationCore, added tests

Changeset: 1dbc7bdf96d58b11aafd7760c2a0db30ded27a4b

[Michael Wedel]

Refs #10432. Using straight-forward detector index

Changeset: 555c1ba8e2f4e08135f4450ee890d35cdb58c4db

[Michael Wedel]

Refs #10432. Adding tests to PoldiAnalyseResiduals

Changeset: c467f9de9b0d92eec2ac0ce52f32be48271463e0

[Michael Wedel]

Refs #10432. Completing PoldiAnalyseResiduals, added tests

Changeset: d30afca6ceaa7dfc9f36c90b177f97c4c2f40310

[Michael Wedel]

Revert "Refs #10432. Removing magic number from CostFuncLeastSquares"

This reverts commit e41045891877341621472360650ff412e8103f52.

Changeset: e5a2f89444797b1fb0c5bdc20699ef8c592f51f2

[Michael Wedel]

Revert "Refs #10432. Small changes to PoldiCalculateSpectrum2D"

This reverts commit 8112591b9bd87638513d306d967f62384de60709.

Changeset: ee28d0dbce4a51585c54189ca6bd0482cfdf0913

[Michael Wedel]

Refs #10432. Had to change reference files for correlation test

Parameters were changed, so in order to get the system test for PoldiAnalyseResiduals working, these files had to be re-calculated using the new parameters.

Changeset: 12ab3832a85f88606ae927b7d7bc3910ae1496e5

[Michael Wedel]

Refs #10432. Adding reference data for new system test.

Changeset: 1e792f620deb996e9b6ef6868350fe44ef97bd99

[Michael Wedel]

Refs #10432. Had to update POLDI parameters for system tests.

Changeset: 7b873c3d6c2b91b7d55e6fb64a7a500d4acd54a5

[Michael Wedel]

Refs #10432. Added system test for PoldiAnalyseResiduals

Changeset: 7e3f1c34b47d311512f440fe35e121d728f5148a

[Michael Wedel]

Refs #10432. Added documentation page

Changeset: a83a6baffa328488168dea7751016f895dcc7960

[Michael Wedel]

Testing information

Make sure that all tests and all system tests are passing. A new system test has been added, which checks that the algorithm performs the analysis correctly.

The documentation does not have a usage example yet, because on current master Poldi data can not be fitted. While implementing this algorithm I discovered that enabling fitting is relatively easy and does not require a lot of code - I will put it into a separate ticket. The usage example for this algorithm will be added in that ticket.

[Michael Wedel]

Refs #10432. Adding includes for std::transform and accumulate

Changeset: c7aa639c7fcef7197f6548ae8fe23e54159a0e14

[Michael Wedel]

Refs #10432. Added another include.

Changeset: 6e7afd6652541f4df70a0ad63974b34181f94b6a

[Michael Wedel]

Refs #10432. Fix typo in rst file

Changeset: 24a6d41781b4d1c8f8017e4d70f14de5eedca616

[Nick Draper]

unit and system tests have been passing since last commit.

[Nick Draper]

POLDIAnalyseResidualsTest passed

Merge and compilation passed

[Nick Draper]

Merge remote-tracking branch 'origin/feature/10432_POLDI_residual_analysis'

Full changeset: ​603ecbc123f6cb90e490a70d2cb6228d39d199a8

[Martyn Gigg]

Merge branch 'feature/10432_POLDI_residual_analysis'

Full changeset: ​cf2a0ffe14bafb150b00a2b5a3925dff3ca3ad46

[Stuart Campbell]

This ticket has been transferred to github issue ​11274