Ticket #7238 (closed: fixed)
Adjust the script ReduceOneSCD_Run to extend to the Mandi and other instruments
Reported by: | Ruth Mikkelson | Owned by: | Dennis Mikkelson |
---|---|---|---|
Priority: | major | Milestone: | Release 2.6 |
Component: | Diffraction | Keywords: | SCD;Redution |
Cc: | mikkelsond@… | Blocked By: | |
Blocking: | Tester: | Vickie Lynch |
Description
The size of unit cells used by SCD instruments vary widely. Another parameter is needed for that and several other parameters need fine tuning.
Attachments
Change History
comment:1 Changed 7 years ago by Ruth Mikkelson
- Owner set to Ruth Mikkelson
- Status changed from new to accepted
comment:2 Changed 7 years ago by Ruth Mikkelson
Refs #7238 Added and used a max_Q parameter
Also there was some minor tweaking
Changeset: 72f7316fb9d1181ec6724b1fcc296d299cee9594
comment:3 Changed 7 years ago by Dennis Mikkelson
- Status changed from accepted to assigned
- Owner changed from Ruth Mikkelson to Dennis Mikkelson
comment:5 Changed 7 years ago by Dennis Mikkelson
RE 7238_ImprvReduceSCDScript
Move max_Q earlier in the config file and add comment about the meaning of max_Q.
refs #7238
Changeset: 4bc3074c68c91c4c3114b298f4dc5cb8691d4e99
Changed 7 years ago by Dennis Mikkelson
- Attachment ReduceMandi306.config added
Script configuration file for protein data, MANDI 306
comment:6 Changed 7 years ago by Dennis Mikkelson
- Status changed from accepted to verify
- Resolution set to fixed
NOTES TO TESTER
The branch name is: feature/7238_ImprvReduceSCDScript
This script can be tested on the SNS LINUX cluster as follows:
- Copy the four files in Code/Mantid/scripts/SCD_Reduction to a scratch directory.
- Edit the file ReduceSCD.config and change the output directory to the scratch directory.
- Run the script using: python ReduceOneSCD_Run.py ReduceSCD.config 5637
- The script should finish in about a minute, producing .mat and .integrate files for the small molecule sapphire.
- Copy the attached protein config file: ReduceMandi306.config to the scratch directory and as before, change the output directory to the scratch directory.
- Run the script using: python ReduceOneSCD_Run.py ReduceMandi306.config 306
- This is a large file, so the script will finish in about six minutes, producing .mat and .integrate files for the protein data.
This verifies that the updated scripts will work for both small and large molecule data.
comment:7 Changed 7 years ago by Alex Buts
- Status changed from verify to verifying
- Tester set to Alex Buts
comment:8 Changed 7 years ago by Alex Buts
- Status changed from verifying to verify
- Tester Alex Buts deleted
looks like simple and reasonable ticket which done properly, but I have no way of accessing MANDI files or anything looking like MANDI files.
The ticket can be verified by SNS only
comment:9 Changed 7 years ago by Vickie Lynch
- Status changed from verify to verifying
- Tester set to Vickie Lynch
comment:10 Changed 7 years ago by Vickie Lynch
- Status changed from verifying to closed
scripts work for me
comment:13 Changed 5 years ago by Stuart Campbell
This ticket has been transferred to github issue 8084