MDWorkspace implementation

[Alex Buts]

(In [6185]) refs #1637 -- basic description of N-D workspace has been added to Documentation

[Alex Buts]

(In [6195]) refs #1637 -- MDWorkspace description is almost completed

[Alex Buts]

(In [6196]) refs #1637 -- cosmetic (minor) changes

[Alex Buts]

(In [6199]) refs #1637 -- cosmetic (minor) changes

[Alex Buts]

(In [6207]) refs #1637 -- changes to documentation: More detailed description of the InstrumentDescrition component has been added

[Alex Buts]

(In [6208]) refs #1637 -- minor changes to documentation

[Alex Buts]

(In [6209]) refs #1637 -- cosmetic (minor) changes to documentation

[Alex Buts]

(In [6339]) refs #1637 -- semi-draft code for workspace. Have not been finished yet, so not in working order

[Alex Buts]

(In [6349]) refs #1637 -- semi-draft code for workspace. Have not been finished yet, so not in working order

[Alex Buts]

(In [6357]) refs #1637 -- semi-draft code for workspace committed to continue work on another machine

[Alex Buts]

(In [6366]) refs #1637 -- read_dnd enabled but not completed; committed to continue work on another machine.

[Alex Buts]

(In [6367]) refs #1637 -- read_dnd enabled but not completed; committed to continue work on another machine.

[Alex Buts]

(In [6368]) refs #1637 -- read_dnd enabled but not completed; committed to continue work on another machine.

[Alex Buts]

(In [6369]) refs #1637 -- read_dnd enabled but not completed; committed to continue work on another machine.

[Alex Buts]

(In [6370]) refs #1637 -- read_dnd enabled but not completed; committed to continue work on another machine.

[Alex Buts]

(In [6372]) refs #1637 -- semi-draft code for workspace: DND read works; committed to continue work on another machine

[Alex Buts]

(In [6511]) refs #1637 -- semi-draft code for workspace: DND read works; committed to continue work on another machine

[Alex Buts]

(In [6514]) refs #1637 -- DND class completed and works properly;

[Alex Buts]

(In [6515]) refs #1637 -- sqw class renamed according to MANTID requests

[Alex Buts]

(In [6516]) refs #1637 -- sqw class renamed according to MANTID requests

[Alex Buts]

(In [6517]) refs #1637 -- parts of rebinning algorithm startd. ;

[Alex Buts]

(In [6520]) refs #1637 -- prototype workspace committed as a separate branch

[Alex Buts]

(In [6529]) refs #1637 -- MD-workspace code added to MANTID; Compiles but tests do not work yet.

[Russell Taylor]

(In [6530]) Exclude MDDataObjects tests from being built as the library is not yet being built. At the same time enable the ICat tests as I assume the disabling of these was only supposed to be temporary. Re #1637.

[Alex Buts]

(In [6550]) refs #1637 -- MD-workspace generally adopted to MANTID, e.g compiles with it but does not yet works; HDF libs have to be modified properly.

[Alex Buts]

(In [6574]) refs #1637 -- szip source code has been added to third party and modified to work under VS-2010

[Alex Buts]

(In [6578]) refs #1637 -- hdf5 source code has been updated to v 1.8.5.sp1 and rebuild to work under VS-2010

[Alex Buts]

(In [6579]) refs #1637 -- hdf5 source code has been updated to v 1.8.5.sp1 and rebuild to work under VS-2010

[Alex Buts]

(In [6580]) refs #1637 -- hdf5 source code has been updated to v 1.8.5.sp1 and rebuild to work under VS-2010

[Alex Buts]

(In [6581]) refs #1637 -- hdf5 added debug and release dll

[Alex Buts]

(In [6582]) refs #1637 -- hdf5 32-bit debug dll modified to understand what is missing

[Alex Buts]

(In [6598]) refs #1637 - HDF-1.8.5 proper hdf5 32 bit debug and release versions have been build

[Alex Buts]

(In [6602]) refs #1637 Added Vates folder to test data

[Alex Buts]

(In [6603]) refs #1637 Matlab hdf-5 test dataset moved into Test\VATES folder

[Alex Buts]

(In [6604]) refs #1637 crude workspace prototype is created and passes all tests; MDPixels part still left untouched

[Martyn Gigg]

(In [6611]) Revert changes to HDF5 library until the NeXus API is rebuilt against the newer version of HDF. Re #1637

[Alex Buts]

(In [6613]) refs #1637 -- hdf5 additional version of hdf5 libs for Hdf5-1.8.5 has been added to allow two versions of HDF coexist temporary

[Alex Buts]

(In [6614]) refs #1637 -- hdf5 additional debug version of hdf5 libs for Hdf5-1.8.5 has been added

[Alex Buts]

(In [6618]) refs #1637 MDGeometry lost before has been added

[Alex Buts]

(In [6625]) refs #1637 Test for all existing parts of the MD workspace has been added and work in some way.

[Alex Buts]

(In [6637]) refs #1637 missing part of the test has been added.

[Alex Buts]

(In [6638]) refs #1637 -- 64 bit DLL for HDF-1.8.5 were added

[Alex Buts]

(In [6639]) refs #1637 minor modifications to the projects attempting to build 64 bit version (not successful)

[Alex Buts]

(In [6643]) refs #1637 IMDWorkspace has been added to API and Matrix Workspace inherits from it rather than from Workspace

[Alex Buts]

(In [6652]) refs #1637 some works with MD-workspace tests. The tests compile but does not provide some files needed for base class (workspace) to run.

need further investigations.

Short description on how HDF5-1.8.5 was build under Win (very crude) added /README_MANTID.txt

[Alex Buts]

(In [6670]) refs #1637 crude MD workspace works; memory management needed as not written yet

[Alex Buts]

(In [6684]) refs #1637 minor modifications to tests and cosmetic changes to the reader -- it now allocates memory for buffer if finds a NULL pointer (bad design, will be modified later) Properties sufficient to run test from the VS2010 have been added and have to be copied in test/Debug or test/Release folders for tests to run properly

[Alex Buts]

(In [6685]) refs #1637 modifications to folders structure to adhere to standard MANTID practice

[Alex Buts]

(In [6686]) refs #1637 modifications to folders structure to adhere to standard MANTID practice

[Alex Buts]

(In [6687]) refs #1637 modifications to folders structure to adhere to standard MANTID practice completed; all works

[Alex Buts]

(In [6690]) refs #1637 test runner has been added

[Owen Arnold]

(In [6694]) refs #1637 Fixed to link to MDDataObjects.lib

[Alex Buts]

(In [6705]) refs #1637 tests modified to run path-independently (in theory) runTests.bat modified properly (Mantid.user.properties need to be adjusted to test folder)

[Alex Buts]

(In [6722]) refs #1637 minor modifications to tests and project structure (filters work properly)

[Alex Buts]

(In [6732]) refs #1637 minor modifications to tests and project structure (filters work properly)

[Alex Buts]

(In [6734]) refs #1637 run tests run on PC again

[Alex Buts]

(In [6742]) refs #1637 MDWorkspace.h class is added

[Alex Buts]

(In [6814]) refs #1637 missing piece of the code has been added

[Russell Taylor]

(In [6819]) Enable DECLARE_WORKSPACE macro use for MDWorkspace (or, more generally, for workspaces not in the DataObjects namespace. Workspaces now need to include their namespace when registering, as is already the case for Algorithms (this can be accomplished by calling DECLARE_WORKSPACE from within the namespace). Re #1637.

[Russell Taylor]

(In [6820]) Fix test. Re #1637.

[Alex Buts]

(In [6831]) refs #1637 slicing property code has been moved to API as this is a property after all

[Alex Buts]

(In [6832]) refs #1637 slicing property header has been moved to API as this is a property after all

[Alex Buts]

(In [6833]) refs #1637 slicing property code moved to code

[Alex Buts]

(In [6834]) refs #1637 slicing property header moved to correct place

[Alex Buts]

(In [6835]) refs #1637 -- slicing property.h deleted temporary as it not redy for build

[Alex Buts]

(In [6836]) refs #1637 -- slicing property.cpp deleted temporary as it not redy for build

[Alex Buts]

(In [6842]) refs #1637 -- slicing properties were returned to the repository until new version of the code which used in in API is ready

[Alex Buts]

(In [6843]) refs #1637 -- slicing properties were returned to the repository until new version of the code which used in in API is ready

[Alex Buts]

(In [7069]) refs #1637 point3D got accessors and mutators, MDDataObjects modified with parts of WorkspaceGeometry moved into other parts of MANTID tests for MD workspace are currently not functioning

[Alex Buts]

(In [7087]) refs #1637 current state MD workspaces MD geometry has moved into Geometry

[Alex Buts]

(In [7088]) refs #1637 Geometry together with MDGeometry tests successful but not completed and messy

[Alex Buts]

(In [7097]) refs #1637 Missed files from MD Geometry

[Alex Buts]

(In [7100]) refs #1637 GCC-specific Modification for MD geometry to compile.

[Alex Buts]

(In [7102]) refs #1637 modifications for MD geometry with lost functionality to satisfy GCC

[Alex Buts]

(In [7103]) refs #1637 to suppress one of the GCC messages

[Martyn Gigg]

(In [7104]) Reinstate lost behaviour and keep gcc happy. Re #1637

[Martyn Gigg]

(In [7105]) Fix a couple of test builds by including the appropriate header. Re #1637

[Alex Buts]

(In [7266]) refs #1637 refs #1640 rough CP rebinning code and workspace which works with CP rebinning. needs further testing, especially for proper reshaping.

[Alex Buts]

(In [7269]) refs #1637 MDPropertyGeometry fixed to satisfy g++

[Alex Buts]

(In [7271]) refs #1637 something strange in template instantiation -- attempting to fix for g++

[Alex Buts]

(In [7272]) refs #1637reverted the broken test

[Alex Buts]

(In [7274]) refs #1637 MD workspace property removed

[Martyn Gigg]

(In [7276]) Get the build going again. Re #1637

[Alex Buts]

(In [7287]) refs #1637 MD workspace holder deleted. modifications to files to work without it. minor changes to ImplicitFunction.h to allow compilation.

[Alex Buts]

(In [7288]) refs #1637 workspace factory modified to avoid ambiguity between MatrixWorkspace and IMDWorkspace

[Alex Buts]

(In [7297]) refs #1637 composite implicit functions reverted to proper state.

[Owen Arnold]

(In [7302]) refs #1637. Error made by last modifier. Line should not have been removed.

[Alex Buts]

(In [7316]) refs #1637 MDWorkspace added back to repository

[Alex Buts]

(In [7383]) refs #1640 refs #1637 Almost all code from the MD workspaces moved to CPrebinning algorithm. Memory corruption as a result, but should compile.

[Alex Buts]

(In [7391]) refs #1637 Studio projects modified to allow Windows build after recent changes in geometry

[Alex Buts]

(In [7398]) refs #1640 refs #1637 rebinding code has been moved into cpr rebining class. All works so far -- some tests still be useful for rebinning.

[Alex Buts]

(In [7454]) refs #1637 All tests for MD geometry finalised for orthogonal slices and work properly CPR tests are due.

[Alex Buts]

(In [7457]) refs #1637 Minor modifications to keep gcc happy

[Owen Arnold]

(In [7522]) refs #1637. Fix. Must be able to new-up MDDimension without being a friend.

[Alex Buts]

(In [7533]) refs #1637 Owen chrefs #1637 MDData and MDPixels renamed accordingly with discussions from 09/11/2010 Owen changes incorporated into the Workspace

[Alex Buts]

(In [7536]) refs #1637 documents and CP rebinding modified according to changes in MDWorkspace refs #1640 CP modified according to MD workspace but fails on file property and MDWorskpace property

[Owen Arnold]

(In [7564]) refs #1637. Modified relationship between MDPoint and MDCell and MDDimension.

[Owen Arnold]

(In [7567]) refs #1637. Modification to MDCell to work in terms of MDPoint rather than abstraction.

[Alex Buts]

(In [7576]) refs #1637 Missing data file commited

[Alex Buts]

(In [7577]) refs #1637 project include missing file properly

[Alex Buts]

(In [7578]) refs #1637 missing test headers added

[Alex Buts]

(In [7598]) refs #1637 MDDataPoint (MD-pixel) and test for it added to MDDataObjects

[Alex Buts]

(In [7601]) refs #1637 Event data test has been added to MDDataPoint (MD-pixel) cosmetic changes to function names

[Alex Buts]

(In [7616]) refs #1637 MDDataPoint verified and modified for possibility to have 32 bit data indexes

[Owen Arnold]

(In [7617]) refs #1637. IMDWorkspace over MatrixWorkspace. Complete method bodies.

[Owen Arnold]

(In [7670]) refs #1637. IMDWorkspace over MatrixWorkspace. Minor fixes to primitive argument types. Minor modifications for operator[] usage for speed-up.

[Alex Buts]

(In [7683]) refs #1637 MDDataPoint enhanced and finalized;

[Alex Buts]

(In [7726]) refs #1637 missing reference to Python debug lib included into VS studio project

[Alex Buts]

(In [7759]) refs #1637 minor modifications to files to satisfy linux

[Alex Buts]

(In [7761]) refs #1637 minor changes to MDDataPoint, its components and tests to bring naming to in agreement with other MD Workspace names

[Alex Buts]

(In [7784]) refs #1637 simpe test for geometry description has been added to the svn

[Owen Arnold]

(In [7788]) refs #1637. Change IMDWorkspace interface to give components as share_pointers.

[Owen Arnold]

(In [7798]) refs #1637. Give better compatibility for MDWorkspace and MatrixWorkspace in terms of IMDWorkspace. MDGeometry modified to use shared_ptr for vectors.

[Alex Buts]

(In [7838]) refs #1637 missing project file for algorithm testing under VS has been added

[Alex Buts]

(In [7839]) refs #1637 IMD_FileFormat got new methods, responsible for loading new parts of the dataset; correspondent methods implemented in MatlabDataFormat #1977 refractoring brought to a working state

[Alex Buts]

(In [7840]) refs #1637 IMD_FileFormat got new methods, responsible for loading new parts of the dataset; correspondent methods implemented in MatlabDataFormat #1977 refractoring brought to a working state

[Alex Buts]

(In [7846]) refs #1637 fixing Linux errors

[Russell Taylor]

(In [7847]) Fix linux/mac build and clear compiler warnings. Re #1637.

[Alex Buts]

(In [7861]) refs #1637 MDDataPoint ->copyPixel function fixed and test for it has been added

[Alex Buts]

(In [8050]) refs #1637 missing project file for algorithm testing under VS has been added

[Alex Buts]

(In [8051]) refs #1637 bug fix in MDPropertyGeometryTest accounting to last changes in MDDimensionDescription.h

[Alex Buts]

(In [8055]) refs #1637 comments and checks to MD Geometry

[Owen Arnold]

(In [8065]) refs #1637. Move towards proper ownership of MDWorkspace objects generated via IMDWorkspace.

[Alex Buts]

(In [8112]) refs #1637 Additional tests for MDImage and bug fixes; refs #2024 tests and improvements for reader.

[Alex Buts]

(In [8123]) refs #1637 IMD_FileFormat got getFileName method. Tests for MDDataObjects modified to know about it.

[Alex Buts]

(In [8125]) refs #1637 some modifications to MDDataPoint to keep the linux happy (not all of them)

[Alex Buts]

(In [8127]) refs #1637 Additional tests and checks for MDGeometry

[Owen Arnold]

(In [8128]) refs #1637 make gcc compatible. Remove GOTOs. Assist templated class resolution.

[Alex Buts]

(In [8129]) refs #1637 Additional tests and checks for MDImage

[Nick Draper]

Bulk move of tickets to iteration 27, if your ticket is essential for Iteration 26 then move it back.

[Alex Buts]

(In [8268]) refs #1637 missing file added

[Alex Buts]

(In [8579]) refs #1881 HDf5 has been sorted out for VATES and Win (at least 32) MDDataObjects and MDAlgorithms build successfully, so redundant VS projects deleted Tests have not been sorted yet, so remain as VS projects linked to cmake-generated solution

refs #1637 testDataGenerator class added as class to "read" artificial data for rebinning. (not fully functional yet)

[Michael Reuter]

(In [8584]) Fix Unix compilation issue. This refs #1637.

[Alex Buts]

(In [8640]) refs #1637 Additional test to check if the load_MDWorkspace algorithm loads MD image correctly

[Alex Buts]

(In [8730]) refs #1637 access to MDDavaPoints has been rewired through MDDataPoints class hiding MDDataReader

[Alex Buts]

(In [8796]) refs #1637 pixels locations moved into MDDataPoints

[Alex Buts]

(In [8863]) refs #1640 simplified cprRebinningNx3 to achieve higher efficiency refs #1637 more tests for workspace components

[Alex Buts]

(In [8876]) refs #1637 more tests and more reliable code

[Alex Buts]

(In [9373]) refs #1640 rebinning, keep pixels in memory completed refs #1637 MDDataPoints manage pixels data placed in memory

[Owen Arnold]

Complete first pass implementation of MDWorkspace. Usage verified via unit tests and MDAlgorithms (CentrePieceRebinning).

MDImage/MDAlgorithm improvements pending next iteration #2411.

[Stuart Campbell]

This ticket has been transferred to github issue ​2484