Calibrate for sample orientation and position for Rectangular Detectors

[Ruth Mikkelson]

Several instruments cannot locate the sample "exactly enough" or determine the sample orientation relative to other runs "exactly enough". This necessitates and algorithm to handle these cases.

Often the errors are caused by the goniometer being tilted. This algorithm allows for finding the tilt.

[Ruth Mikkelson]

Refs #6550 Initial checkin for this ticket

Changeset: 9a3d26bc1337eccbb795f9a98bce7c673b7118ad

[Ruth Mikkelson]

Refs #6550 Rest of the files

Changeset: 422d71e4e9a7e61569e14ba5561032725d34abd1

[Ruth Mikkelson]

Refs #6550 Eliminated compiler error in Windows

Changeset: 61d3fe5b10828b117f1f66d5f24ed91c5728564c

[Russell Taylor]

Re #6550. Really fix on windows so that I can push stuff.

BTW - this test takes WAY too long to run.

Changeset: 742042b266f2065037bf63ee85be2dda304f8f57

[Ruth Mikkelson]

refs #6550 Hopefully fixes wind prob

Changeset: 83328cf8f49e65345447c64b9171dec5e7fb1756

[Ruth Mikkelson]

Refs #6550. Sped up the unit test

Changeset: c146a7c5f1880965a51681ad2b28bda41482f397

[Ruth Mikkelson]

Refs #6550 Added options for finer control

Refs #6591 Changed the name of IndexOptimizePeaks to OptimizeCrystalPlacement Refs #6142 Eliminated(hopefully) several warnings or explained them.

Changeset: e49c6b5a87e7c8f3b167d581d25a498522353b9c

[Ruth Mikkelson]

Refs #6550 Added properties to OptimizeCrystalPlacement

-Properties to select the peaks used in fitting were added. -A boolean property was added to select whether sample offsets are to be

considered in fitting

-Changed the names of several properties and gave longer prompts -Eliminated IndexPeaks optionq -Sped up the test program a lot. The LoadIsawPeaks now takes almost all the time.

Refs #6086 Added Documentation and explanations

Changeset: 99221a0b46a2f8b61df09c57e761c0ffe6000bec

[Ruth Mikkelson]

Refs #6550 out has 3 entries per peak. Tilt parameters added

Before the one output per peak was the integer offset of the h,k and l value

that was the max in absolute value.

Now the output for each peak is the integer offset of the h value, then the integer offset of the k value, then the 3rd is the integer offset of the l value.

Changeset: 822776e3a50a759dab15f5f80d07a219afa1e4f6

[Ruth Mikkelson]

Refs #6550 out has 3 entries per peak. Tilt parameters added

Before the one output per peak was the integer offset of the h,k and l value

that was the max in absolute value.

Now the output for each peak is the integer offset of the h value, then the integer offset of the k value, then the 3rd is the integer offset of the l value.

Changeset: 822776e3a50a759dab15f5f80d07a219afa1e4f6

[Ruth Mikkelson]

Tester:

The file in AutoTestData, TOPAZ_5637_8.peaks will work well for testing. There are 2 runs, 5627 and 5638. Allowing everything to change results in large errors in the parameters. Before running Use FindUBFFT then indexPeaks to get into proper form for this algorithm

1St test: KeepGoniometerFixed:5637,5638. OptimizeGoniometerTilt=true, Result->Peak1

2nd test:Use Peak1 from Test 1 , KeepGoniometerFixed: , all options false, Result->Peak2. ......

You can save the PeaksWorkspaces to see differences. The PeaksWorkspaces could also be reindexed, to see any(probably no) differences. There should be few changes since this peaks workspace came from well calibrated experiments.

[Owen Arnold]

Which Branch?

[Ruth Mikkelson]

Refs #6550 Added Tilt parameter and 3 output values per peak

Also includes some cpp warning fixes and wiki updates

Changeset: 9e1bb6137bdd8b1ad1c6a15f3e1d2cca028228e1

[Ruth Mikkelson]

Refs #6550 Added Tilt parameter and 3 output values per peak

Also includes some cpp warning fixes and wiki updates

Changeset: 9e1bb6137bdd8b1ad1c6a15f3e1d2cca028228e1

[Ruth Mikkelson]

Refs #6550 Added a test program

Changeset: a1fac66778b85e628455eda5a93981db28782699

[Ruth Mikkelson]

Refs #6550 Added a test program for OptimizeCrystalPlacement

Changeset: bd9cd19c6f8ac4c29050e0d68c14c178d802af49

[Ruth Mikkelson]

Refs #6550 Eliminated commits to redo

Revert "Merge branch 'feature/6550_OptCrystPos' into develop"

This reverts commit e59d1765743f7d525417128cde2228fb4c22cf2a, reversing changes made to dee0a70882860d52a1733362df8baa3916d56803.

Changeset: 636508ae4979910b586c214403e9fbbeee54e6a4

[Ruth Mikkelson]

Refs #6550 Published a revert already

"Refs #6550 Added a test program"

This reverts commit a1fac66778b85e628455eda5a93981db28782699.

Changeset: 1a6738c886201a20f78d7b5acd8f1639a91491a8

[Ruth Mikkelson]

Refs #6550 Reverted this commit elsewhere.

Revert "Refs #6550 Added Tilt parameter and 3 output values per peak"

This reverts commit 9e1bb6137bdd8b1ad1c6a15f3e1d2cca028228e1.

Changeset: aac3eea02aee8f41400b5c439b11f005654dcffe

[Ruth Mikkelson]

Refs #6550 Added Tilt parameter and 3 output values per peak

Also includes some cpp warning fixes and wiki updates

Changeset: 9e1bb6137bdd8b1ad1c6a15f3e1d2cca028228e1

[Ruth Mikkelson]

Refs #6550 Added a test program

Changeset: a1fac66778b85e628455eda5a93981db28782699

[Ruth Mikkelson]

Refs #6550 Published a revert already

"Refs #6550 Added a test program"

This reverts commit a1fac66778b85e628455eda5a93981db28782699.

Changeset: 1a6738c886201a20f78d7b5acd8f1639a91491a8

[Ruth Mikkelson]

Refs #6550 Reverted this commit elsewhere.

Revert "Refs #6550 Added Tilt parameter and 3 output values per peak"

This reverts commit 9e1bb6137bdd8b1ad1c6a15f3e1d2cca028228e1.

Changeset: aac3eea02aee8f41400b5c439b11f005654dcffe

[Owen Arnold]

I actually merged this into master last week, but forgot to close the ticket.

[Ruth Mikkelson]

Refs #6550 Added Tilt parameter and 3 output values per peak

Also includes some cpp warning fixes and wiki updates

Changeset: 9e1bb6137bdd8b1ad1c6a15f3e1d2cca028228e1

[Ruth Mikkelson]

Refs #6550 Added a test program

Changeset: a1fac66778b85e628455eda5a93981db28782699

[Ruth Mikkelson]

Refs #6550 Published a revert already

"Refs #6550 Added a test program"

This reverts commit a1fac66778b85e628455eda5a93981db28782699.

Changeset: 1a6738c886201a20f78d7b5acd8f1639a91491a8

[Ruth Mikkelson]

Refs #6550 Reverted this commit elsewhere.

Revert "Refs #6550 Added Tilt parameter and 3 output values per peak"

This reverts commit 9e1bb6137bdd8b1ad1c6a15f3e1d2cca028228e1.

Changeset: aac3eea02aee8f41400b5c439b11f005654dcffe

[Ruth Mikkelson]

Refs #6550 Added Tilt parameter and 3 output values per peak

Also includes some cpp warning fixes and wiki updates

Changeset: 9e1bb6137bdd8b1ad1c6a15f3e1d2cca028228e1

[Ruth Mikkelson]

Refs #6550 Added a test program

Changeset: a1fac66778b85e628455eda5a93981db28782699

[Ruth Mikkelson]

Refs #6550 Published a revert already

"Refs #6550 Added a test program"

This reverts commit a1fac66778b85e628455eda5a93981db28782699.

Changeset: 1a6738c886201a20f78d7b5acd8f1639a91491a8

[Ruth Mikkelson]

Refs #6550 Reverted this commit elsewhere.

Revert "Refs #6550 Added Tilt parameter and 3 output values per peak"

This reverts commit 9e1bb6137bdd8b1ad1c6a15f3e1d2cca028228e1.

Changeset: aac3eea02aee8f41400b5c439b11f005654dcffe

[Ruth Mikkelson]

Refs #6550 Added Tilt parameter and 3 output values per peak

Also includes some cpp warning fixes and wiki updates

Changeset: 9e1bb6137bdd8b1ad1c6a15f3e1d2cca028228e1

[Ruth Mikkelson]

Refs #6550 Added a test program

Changeset: a1fac66778b85e628455eda5a93981db28782699

[Ruth Mikkelson]

Refs #6550 Published a revert already

"Refs #6550 Added a test program"

This reverts commit a1fac66778b85e628455eda5a93981db28782699.

Changeset: 1a6738c886201a20f78d7b5acd8f1639a91491a8

[Ruth Mikkelson]

Refs #6550 Reverted this commit elsewhere.

Revert "Refs #6550 Added Tilt parameter and 3 output values per peak"

This reverts commit 9e1bb6137bdd8b1ad1c6a15f3e1d2cca028228e1.

Changeset: aac3eea02aee8f41400b5c439b11f005654dcffe

[Stuart Campbell]

This ticket has been transferred to github issue ​7396